Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0915 ATGGCGTTGTTCAGGAAGTTCTTTTATAAGAAGCCGCCCGAAGGGCTTCTGGAAATTTCTGAAAGTGTTTATGGTACGTTTTCCATGTGTTCATTTCGCATATGCATTGGTTCTTCAAGGATTTTTGATTACTGCTTTACCACGGATGTTTTGGAGGAAGATGAATATAAAGTGTATATATCGGGAATTATTGGGCAACTTCACGATCACTTCCCTGATTCTTCATTTATGGTGTTTAACTTTCGGGAGGGAGAACATCAAAGCCTGATTGCTAGTATTTTGTGTGACTATGATATGACAGTAATGGAATATCCTCGACAGTATGAAGGTTGTCCATTACTCACTATGGAGACGATCCACCACTTCTTAAGATCAGGTGAAAACTGGCTTCAACTTGGGCATCACAATCTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCGTTCATGCTGGCTGCTCTCTTGATTTATAGGAAGCAATATACAGGGGAGCAGAAAACCTTAGACATGATATACAAGCAAGCACCTCGGGAACTTTTGCAGTTGATGTCACCATTGAATCCTTTACCTTCACAATTGAGGTATCTTCAGTATGTATCAAGAAGAAATGTTGGTTCACAATGGCCTCCTCTAGATAGGGCACTTACTTTGGATTGTATTATTCTAAGATGCATTCCTAATATGGATGGAGAGGGTGGTTGCCGTCCTATATTTAGAATATATGGACAGGACCCTTTTATGGCTTCTGATCGGACTCCCAAAGTTCTTTTTTCAACTCCAAAAAGGAGCAAAGTTATCCGGCATTACAAGCAGGCTGATTGTGAACTAGTAAAAATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTACTCTAGATAGTGATTTGGAACGTGAGCAAATGATGTTTCGGGTCATGTTTAATACAGCATTCATTAGATCAAATATTTTGATGCTTAATCGTGATGAAATTGATGTATTATGGAATGGTAAAGACCAATTCCCAAAAGATTTTAGAGTAGAGGTTCTTTTCTCAGATATGGATGCTTCTTCTTCTGTTATATCAATTGATCTGCCACGAATAGAGGAGAAAGAAGGTCTTCCTATTGAAGCGTTTGCTAAGGTCCAAGAAATTTTCAGCAATGTTGACTGGTTAGACTCAAAGGCAGAGGTAGCAAATGTGCTCCAGCAGATTTCAGCATCAAATATGCTTCTAGAAAGAATGGACAGTGGGGTTTCTGCTGCAACAAGCAACTTGCTAAGGGATTCATTGTCTGGAAGATTTAAACTTGACCCAAAGACACTACCAGAAAATGATATCAAAAGTATGACATCCACAGTTCCAGGAAAGCTATCTACTTCCTCATTTGAATCAATTACGGATGCTTCTAATAACAGGAGCGTGGAACCATTAGATTCAAAGGCGTTGTCAGAAAATGACATCAACATTCCTGCATCCACAAGTCAGAAACAATTAAATTCTTCAGAACCCTCATTGGATTCAAATTCTACTAAAAAGAATATATTGTTGGAATCAAAGGCATCACTAGAAAATGATACTAAGGGGAATCAATCCATTTCCTCAGTTGAACCACCCGTGTATGCAAACTCAACGGAAAAGAAGATTGAATCGCTAGGAATGAAGGCATTAACGGAACATGATACCAAATATGTTAGGTCAATGGTTGAAGGGAAGCAATCTGCTCTTTCGATTGAATCATCCATGCAAGCAAATtcaatgagaaaaaaaattgaaccatTAGAATCAAAGGCATTGTCAGAAAATGATACCGAGAGTCTTGCATCCACAGCTCAGACCAAAGAATCTGTTCACTCAAATGAATCTTCCAATGATGTTAATTCTCTTAGAAAAAAGATTGAACCTCAGGATTTGCAAGTGGCACTTCAGTTGCCTACCCAATCCAAAATCATTTCTCCACGGGTGCGTCAAGCTTCTAGATCTGCTCCAGTTTTATATTGTAGTTCTTTACAAGGTTCTTCTGTACCTATATCAAGATATCATAGTGCACCATCAGCCATTGGAATAACAGCTTTGTTGCAGGATCATGCTGCAATTGATATCAAGGAAGAAGCCAGTCATGGAGTGATAGTGTCTCCCGCTTCTTCTACAATATCTTCTTCTGTCTTAGAGGTGCCAAAATCTACAGTGCCAAGTTCTGCATGTGTTTCTCCAGTCTCATCATCAACGTTGCTGCGATCTTCAGCACTAAAGCCTTCAGAGGACGTTTCCGGTGTCATTAGGCCCCTTGGTCCTGTTATtgcttctcctcctccttcatCTCAGCCTACTTCAGAACTTATGCAACCTATTGTCACTCAGCACTCCGAAAATACAATGTACGATAGAAGTAAAAAGTCATTAGTTTCTCCTCCTCAACTTCAGCCTACTTTAGAATTGATGCAACCTGTCTTAACCCAACACCCTGATAACACAATGCATGATAGAAGTGAAAAGTCATTAGTTTCTCCTCTTGTACCTTTCCCATCTATTCCTCAATCTATTGAGAGTTCTCCTCCAAACACAACCGTTACtcttcctccatcttcttccatGAAGAACTCATTTTCAAGCCCCCCTCCATCATCTCCTGCCTCTCCACCACCCTCTTGTCCTGGAACATCTGCACATTTCACTGTAAAAAAATCATCCAAAGCTTCTCCGCCCCCACCTCTTCACCCACCATCAGTTTTTGTTCCTCCATCTTCATCCATGAAGAGCTCATTTTCAACCCTTCCTTATCCTCCTCCAACACCTCCAGCACCCCCTTCCTTTCCTGTAACATATCCACATGTCATTGTAGAAAATTCATTCATTACTCCAACTCCAACTCCCCCACCACCAACTCCAGTTCCTATTCCTACTTCTTCCATAATGACCTCATTGTCAACCCCTCCTTCACCACCTCTATCCCCACCATCACCTTCTTCTCTTCCTGGAACAATTTCACATTCTGTAGTAGAACATTCATTCAAAGCTCCCCCGCCCCCGCCCCCGCCCCCATCCCTATCCTCATCTGTTCAGACCTCCTTTTCACCTTCCCCTCCACTCTCTGGGATTCCTTCTTCAAATGCCCATCTTAATCCTTCTTCCCAGAGTATGGATAATTCTTCTGCTATCTGTAGTCCTCCTCCCCCACCTCCACCTCCTAGGCATTTTGGAACCACATCTAGTCCTACTCGTGCATCATCAGTGCCACCACCACCCCCTCCACCTACTTCTCCCAAAACTTCGTGTAAGAATACTGCCCCTGTTCCACCAGTACCTCCTCCACCTTTTCCTTCTGCTAATGGGTTGTCAAGTGCTGTGACTCTCGCTCCTGGAGTTGGTAATGGAAATGCACCTCCAGTTCCTGGACCACCTGGTGTTCCAAGACCTCCTGGTGTTCCAGGACCTCCTGGTGTTCCTGGACCGCCTAGTATTCCATTTGGAGCAAAGGGACGTGGCTTGTTGCGAAGTAATGCAAAAAATCAAAGCCAAACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACAAGGGTCATGCATGGAAGTTTATGGGCTGAGACGCAGAAGCCTGATGAAGCCTCGAAGGCTCCTGAGTTTGACATGTCGGAACTTGAAAGTCTTTTCTCCGCAGCAGCCCCAAATTCTGATCGTGGAAGCAAAGGAGAAAAATCCAAAAGTCGTGCCTCTACTAAAGTTGAAAAAGTTCAACTGATTGAGCTACGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTAAAAATCCCTTTGCCAGATTTAATGAGCTCTGTGCTTGCATTGGATGATTCTGCATTAGATGTTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCAACCAAGGAAGAGATGGAACTGCTCAAGAACTACAATGGAGATAAGGACAACTTGGGAAGGTGTGAACAGTTCTTCTTGGAGTTGATGAAAGTGCCAAGAGTAGAAAGCAAGTTAAGAGTTTTCTCTTTTAAAATACAATTCGGCACACAGGTTTCTGAGCTTAGAAGGGACTTGAATATTGTAAATTCTGCATCTGAAGAGGCAAGTCATATTTCTATCAGGAATTCAGTTAAGTTGAAAAGAATTATGCAGACCATTCTTTCTCTTGGTAATGCTTTAAACCATGGAACTGCAAGAGGTTCTGCTATTGGGTTTCGACTGGATAGTCTCCTTAAACTCACTGATACACGGGCCAGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTCCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCTCGAAAGACCTAGTGAATTTGGAGGCTTCAACCAAGATACATTTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGGCCTGTGTCAGAATTTTTCTGCAAGacTTTAAAGGGATTCCTTTGTGATGCTGAAGCTGACGTGAGGTCTTTGGCTCAACTTTATTCAAATGTGGGAAGAAACGCAGATGCGTTGGCTCAATACTTCGGAGAAGATCCTGCACGTTGCCCATTTGAACAAGCAGAAAAGCAGGAGTTATATGGCGTTCAGTTGGATCGATGGACTACTTGTAGGATAATGGTCAGCAATTTTGGTGTACAAAGTATATGA 4698 0.414 MALFRKFFYKKPPEGLLEISESVYGTFSMCSFRICIGSSRIFDYCFTTDVLEEDEYKVYISGIIGQLHDHFPDSSFMVFNFREGEHQSLIASILCDYDMTVMEYPRQYEGCPLLTMETIHHFLRSGENWLQLGHHNLVLMHCERGGWPVLAFMLAALLIYRKQYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGSQWPPLDRALTLDCIILRCIPNMDGEGGCRPIFRIYGQDPFMASDRTPKVLFSTPKRSKVIRHYKQADCELVKIDIHCHVQGDVVLECITLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDVLWNGKDQFPKDFRVEVLFSDMDASSSVISIDLPRIEEKEGLPIEAFAKVQEIFSNVDWLDSKAEVANVLQQISASNMLLERMDSGVSAATSNLLRDSLSGRFKLDPKTLPENDIKSMTSTVPGKLSTSSFESITDASNNRSVEPLDSKALSENDINIPASTSQKQLNSSEPSLDSNSTKKNILLESKASLENDTKGNQSISSVEPPVYANSTEKKIESLGMKALTEHDTKYVRSMVEGKQSALSIESSMQANSMRKKIEPLESKALSENDTESLASTAQTKESVHSNESSNDVNSLRKKIEPQDLQVALQLPTQSKIISPRVRQASRSAPVLYCSSLQGSSVPISRYHSAPSAIGITALLQDHAAIDIKEEASHGVIVSPASSTISSSVLEVPKSTVPSSACVSPVSSSTLLRSSALKPSEDVSGVIRPLGPVIASPPPSSQPTSELMQPIVTQHSENTMYDRSKKSLVSPPQLQPTLELMQPVLTQHPDNTMHDRSEKSLVSPLVPFPSIPQSIESSPPNTTVTLPPSSSMKNSFSSPPPSSPASPPPSCPGTSAHFTVKKSSKASPPPPLHPPSVFVPPSSSMKSSFSTLPYPPPTPPAPPSFPVTYPHVIVENSFITPTPTPPPPTPVPIPTSSIMTSLSTPPSPPLSPPSPSSLPGTISHSVVEHSFKAPPPPPPPPSLSSSVQTSFSPSPPLSGIPSSNAHLNPSSQSMDNSSAICSPPPPPPPPRHFGTTSSPTRASSVPPPPPPPTSPKTSCKNTAPVPPVPPPPFPSANGLSSAVTLAPGVGNGNAPPVPGPPGVPRPPGVPGPPGVPGPPSIPFGAKGRGLLRSNAKNQSQTKRSNLKPYHWLKLTRVMHGSLWAETQKPDEASKAPEFDMSELESLFSAAAPNSDRGSKGEKSKSRASTKVEKVQLIELRRAYNCEIMLTKVKIPLPDLMSSVLALDDSALDVDQVENLIKFCPTKEEMELLKNYNGDKDNLGRCEQFFLELMKVPRVESKLRVFSFKIQFGTQVSELRRDLNIVNSASEEASHISIRNSVKLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLVNLEASTKIHLKYLAEEMQAISKGLEKVVQELTASENDGPVSEFFCKTLKGFLCDAEADVRSLAQLYSNVGRNADALAQYFGEDPARCPFEQAEKQELYGVQLDRWTTCRIMVSNFGVQSI 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0915 1565 ProSiteProfiles C2 tensin-type domain profile. 215 354 IPR014020 -
Sto5g0915 1565 SMART PTEN_C2_2 213 353 IPR014020 -
Sto5g0915 1565 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1182 1535 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 441 511 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 1075 1109 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 445 479 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 821 1161 - -
Sto5g0915 1565 Pfam Formin Homology 2 Domain 1171 1536 IPR015425 -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 843 872 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 953 967 - -
Sto5g0915 1565 Gene3D - 212 357 - -
Sto5g0915 1565 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1169 1565 IPR015425 -
Sto5g0915 1565 SMART it6_source 831 1562 IPR015425 -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 600 624 - -
Sto5g0915 1565 Gene3D Formin, FH2 domain 1164 1539 IPR042201 -
Sto5g0915 1565 Gene3D Protein tyrosine phosphatase superfamily 29 207 IPR029021 -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 1018 1052 - -
Sto5g0915 1565 PANTHER FORMIN-J 1 1540 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 845 861 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 870 882 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 892 913 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 926 942 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 948 965 - -
Sto5g0915 1565 PRINTS Proline rich extensin signature 967 992 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 925 940 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 1221 1240 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 594 628 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 1126 1153 - -
Sto5g0915 1565 Pfam C2 domain of PTEN tumour-suppressor protein 216 352 IPR014020 -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 1053 1067 - -
Sto5g0915 1565 MobiDBLite consensus disorder prediction 486 511 - -
Sto5g0915 1565 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 217 354 IPR035892 -
Sto5g0915 1565 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 78 203 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0915 Sto-Chr5 6173048 6183994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0915 599 703 FH2 protein (formin) Gene Family AT2G25050 39.815 3.71e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0915 - - mdm:103421015 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0915 5 6173048 6183994 Sto5g0915 5 6173048 6183994 ECH