Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0914 ATGGATGGAAAGGGTGAAACGCTTCAGGCGGAGTTGAAACGTGTGAGAGAGGAGAATAACACTCTGAGAGTGATGCTTGAAGTTCTGAGCAGCAAATACAAGAAGCTTCAGTCCCAAGTTGAAGAAACAAGGGTAGATCAGTCAGATTTCGAGACAAATAAGAGACCAAGAATTGAGCTTCCCATAGCTCATAAACCACTACAGATTTTTGCCAGAACCCACCCCATGGATAACAGTTtgACGGTAAGAGATGGCTATCAATGGAGAAAGTATGGTCAGAAAGTCACCAAAGACAATCCATCGCCTCGAGCTTACTTCAGGTGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAgGTACAAAGATGCGTAGAAGACCGCTCTATCCTCGTTGCAACTTATGAAGGAGAGCACAACCATGGAGTTGTTGATCCTAGTACTCCTCAAATCTCAATAATTGCTGACGACAAAGAAGCAAGAACGATCAACTTTAAGGATGATGTTGGTCTTCCTGCTGCTGCTTTTGCTCAAATACATACAAGACACAGTAGTGAAGATCTGAGCAATACCAGAATTGAACAATATGTGGGTTCTCTGATCAAAGATCCAAGCTTTACCATATCGCTAGCGGAAGCAGTCGCACGCTCCATCACTACCCAACAACGTAAGCAACAAGAACTCGACCTTAATTTAAGTCTCGCCGAAGTGTAA 711 0.4332 MDGKGETLQAELKRVREENNTLRVMLEVLSSKYKKLQSQVEETRVDQSDFETNKRPRIELPIAHKPLQIFARTHPMDNSLTVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVEDRSILVATYEGEHNHGVVDPSTPQISIIADDKEARTINFKDDVGLPAAAFAQIHTRHSSEDLSNTRIEQYVGSLIKDPSFTISLAEAVARSITTQQRKQQELDLNLSLAEV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0914 236 ProSiteProfiles WRKY domain profile. 84 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g0914 236 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 219 IPR044810 GO:0003700
Sto5g0914 236 Gene3D WRKY domain 70 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g0914 236 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g0914 236 SUPERFAMILY WRKY DNA-binding domain 77 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto5g0914 236 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 219 - -
Sto5g0914 236 Pfam WRKY DNA -binding domain 84 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto5g0914 236 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0914 Sto-Chr5 6171404 6172512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0914 8 222 WRKY Transcription Factor Family AT2G25000 38.174 3.77e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto5g0914 WRKY 7.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0914 - - gmx:100170679 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0914 5 6171404 6172512 Sto9g3360 9 33450721 33451719 CCT