Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto5g0914 | ATGGATGGAAAGGGTGAAACGCTTCAGGCGGAGTTGAAACGTGTGAGAGAGGAGAATAACACTCTGAGAGTGATGCTTGAAGTTCTGAGCAGCAAATACAAGAAGCTTCAGTCCCAAGTTGAAGAAACAAGGGTAGATCAGTCAGATTTCGAGACAAATAAGAGACCAAGAATTGAGCTTCCCATAGCTCATAAACCACTACAGATTTTTGCCAGAACCCACCCCATGGATAACAGTTtgACGGTAAGAGATGGCTATCAATGGAGAAAGTATGGTCAGAAAGTCACCAAAGACAATCCATCGCCTCGAGCTTACTTCAGGTGTTCCATGTCTCCAAACTGCCCAGTCAAAAAGAAgGTACAAAGATGCGTAGAAGACCGCTCTATCCTCGTTGCAACTTATGAAGGAGAGCACAACCATGGAGTTGTTGATCCTAGTACTCCTCAAATCTCAATAATTGCTGACGACAAAGAAGCAAGAACGATCAACTTTAAGGATGATGTTGGTCTTCCTGCTGCTGCTTTTGCTCAAATACATACAAGACACAGTAGTGAAGATCTGAGCAATACCAGAATTGAACAATATGTGGGTTCTCTGATCAAAGATCCAAGCTTTACCATATCGCTAGCGGAAGCAGTCGCACGCTCCATCACTACCCAACAACGTAAGCAACAAGAACTCGACCTTAATTTAAGTCTCGCCGAAGTGTAA | 711 | 0.4332 | MDGKGETLQAELKRVREENNTLRVMLEVLSSKYKKLQSQVEETRVDQSDFETNKRPRIELPIAHKPLQIFARTHPMDNSLTVRDGYQWRKYGQKVTKDNPSPRAYFRCSMSPNCPVKKKVQRCVEDRSILVATYEGEHNHGVVDPSTPQISIIADDKEARTINFKDDVGLPAAAFAQIHTRHSSEDLSNTRIEQYVGSLIKDPSFTISLAEAVARSITTQQRKQQELDLNLSLAEV | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto5g0914 | 236 | ProSiteProfiles | WRKY domain profile. | 84 | 143 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sto5g0914 | 236 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 2 | 219 | IPR044810 | GO:0003700 | |
Sto5g0914 | 236 | Gene3D | WRKY domain | 70 | 142 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sto5g0914 | 236 | SMART | WRKY_cls | 82 | 142 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sto5g0914 | 236 | SUPERFAMILY | WRKY DNA-binding domain | 77 | 142 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sto5g0914 | 236 | PANTHER | WRKY TRANSCRIPTION FACTOR 49 | 2 | 219 | - | - | |
Sto5g0914 | 236 | Pfam | WRKY DNA -binding domain | 84 | 140 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sto5g0914 | 236 | Coils | Coil | 12 | 46 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto5g0914 | Sto-Chr5 | 6171404 | 6172512 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto5g0914 | 8 | 222 | WRKY Transcription Factor Family | AT2G25000 | 38.174 | 3.77e-43 | 144 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Sto5g0914 | WRKY | 7.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto5g0914 | - | - | gmx:100170679 | 269.24 |