Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0911 atgggtttgggaATTTTTATCCCATGGTTGATATGTTGCTTTCATGGGGAAAAGCTTGGTGAAAACCCTTGTGTGAGGGCTTCACCAAAACCTTCCATTTACGAGGGCTTCAAGTTTTTCCAAGAATCATCAATGGAGGAGAGGGATAGCAATACTACTCTGTTCGGGCGTTACGAAATGGGGAGGGTTCTAGGGAAAGGGACGTTCGCAAAAGTTTACTACGGCAAGCATATCGGAAGCGGCGAGAGCGTGGCGATCAAAGTGATAAGCAAAgagaaagtgaagagagagGGAATGATGGAGCAGATCAAGCGCGAGATCTCCGTGATGCGATTGGTTCGCCATCCAAACGTCGTAGAGCTCAAGGAAGTTATGGCCACCAAAACCAAGATCTTCTTCGTCATGGAGTATGTTCGCGGCGGCGAGCTCTTCGCTAAGCTCGCTAAAGGCAAGCTCAAGGAGGATCTCGCTCGTAAGTATTTCCAACAATTGATCGGCGCCGTTGATTTCTGCCACAGCAGAGGCGTCTCGCACCGAGATCTGAAGCCGGAGAATCTCTTACTGGACGAGTATGAGAATCTTAAGATCTCCGATTTCGGCCTCTCGGCGTTGCCGGAGCATCTCCGGTACGACGGCCTCCTCCACACGCAGTGCGGCACTCCGGCGTATGTTGCCCCTGAGGTTCTGAGAAAGAAAGGCTATGATGGATCGAAAACGGATATTTGGTCCTGTGGTATAATTCTCTATGCATTACTTGCCGGTTTTCTCCCTTTTCAACACGAGAGTCTTATCACTATGTACACCAAGATCTTCAAAGCCGAGTTTCAGTTTCCTCCGTGGTTTTCAGCGGAATCGAAGAGATTGATTTCGAAAATTCTGGTGCCAGATCCAGAGAGGCGAATTTCGATTTCTGCGATTATGCGAGTCCCGTGGTTTCAgaaagggttttcagtggcaTCCGCATTTCAATTAGAAGAAACAACGACTAATTTTGAAGAAGATTCCAGTTCCAGAACCAAGCTTTCATTATCTTCATCGCCTAAATTTTTTAACGCCTTCGAGTTCATCTCGAGCATGTCTTCGGGATTTGATTTGTCTGGATTGTtcgagaagaagaggaagagtggATCAATATTCACGTCCAAGTGTTCGGCTACGGCGATTATGTCAAAGATTGAGAGTGTGGCGAAGGGGTTAAACTTCAAGGTGGGAAAGGTGAAAGACTTTAAAATCAGGTTGGAAGGGCGATCGGAGGGGAGGAAAGGGAGGTTGTATGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAAGTTGCCGTGGTGGAGCTTTCAAAGTGTTCCGGCGACACCTTAGAATATGCCAAATTTTGCGAGGAAGACGTTAGGCCTGCGTTGAAGGACATTGTTTGGACGTGGCAGGGTGATGGAAACAAAACCGATGGTTCTAGAGAAGAGTCAATAATGTAG 1464 0.4556 MGLGIFIPWLICCFHGEKLGENPCVRASPKPSIYEGFKFFQESSMEERDSNTTLFGRYEMGRVLGKGTFAKVYYGKHIGSGESVAIKVISKEKVKREGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKLAKGKLKEDLARKYFQQLIGAVDFCHSRGVSHRDLKPENLLLDEYENLKISDFGLSALPEHLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKTDIWSCGIILYALLAGFLPFQHESLITMYTKIFKAEFQFPPWFSAESKRLISKILVPDPERRISISAIMRVPWFQKGFSVASAFQLEETTTNFEEDSSSRTKLSLSSSPKFFNAFEFISSMSSGFDLSGLFEKKRKSGSIFTSKCSATAIMSKIESVAKGLNFKVGKVKDFKIRLEGRSEGRKGRLYVTAEVFEVAPEVAVVELSKCSGDTLEYAKFCEEDVRPALKDIVWTWQGDGNKTDGSREESIM 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0911 487 CDD STKc_SnRK3 57 311 - -
Sto5g0911 487 SMART serkin_6 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0911 487 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Sto5g0911 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Sto5g0911 487 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Sto5g0911 487 Pfam NAF domain 347 405 IPR004041 GO:0007165
Sto5g0911 487 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 51 478 - -
Sto5g0911 487 Gene3D Kinase associated domain 1, KA1 344 470 - -
Sto5g0911 487 PANTHER - 51 478 - -
Sto5g0911 487 ProSiteProfiles Protein kinase domain profile. 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0911 487 Gene3D Transferase(Phosphotransferase) domain 1 138 318 - -
Sto5g0911 487 ProSiteProfiles NAF domain profile. 345 370 IPR018451 GO:0007165
Sto5g0911 487 Pfam Protein kinase domain 58 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0911 487 Gene3D Phosphorylase Kinase; domain 1 47 137 - -
Sto5g0911 487 CDD CIPK_C 351 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0911 Sto-Chr5 6140891 6142945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0911 46 479 CBL-interacting serine-threonine protein kinases AT5G25110 70.227 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto5g0911 Pkinase 3.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0911 - - tcc:18587713 696.812