Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0904 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTGGTTCTCGACCATCACGATCCCACCACGAATGCAACAGTCGGCGGTCACTTCCGCATTTGGAATGCCTTCTCTGCGTCCTCAATCCGCCGCTTTCTTTTCGATGCCGTCAGCTGTGGCGGTGGCTCTCGCCATCACCGCCACCGTGACAATGACTTCAGCTCCAACGACTCAACGACCACATCATCCTCCGGGAGCTCAAAGGATAAGTCGCAGGAGCAGATGCAAGAAGGTTCCAAGTCGCAGCCGAATCCGAATGCGGTGAGGTCGGAGAAACTAGCGGATCTTCTGAATATAGCGGAGTCTGAAATTGACGTCCAaacgaagaagaaggagaaagcaTTGGAGGAGCTGAAGACAATTGTGAAGGAGTTGCAGAGTGAGGATTTGACGAAGCGGGAAATGGCTGCCGCCAGAGTGAGGTTGCTCGCGAAGGAAGACTCGGAAGTCAGAGGGACGTTTGCGATGCTTGGAGCTATACCTCCTCTTGTTGGAATGCTTGATTTGGAAGACGTTAGTTCTCAGATCTCTTCGCTCTATGCGTTGCTCAATCTCGGAATCGGCAACGACGCAAACAAAGCAGCCATTGTCAAAGTTGGAGCTGTTCACAAGATGCTGAAGCTCATTGAATCACCAACTGCTCCAGATTCATCAGTCTCTGAAGCAATTGTTGCAAACTTCCTGGGCTTGAGTGCTTTGGATTCGAATAAACCAATAATTGGATCCTCTGGTGCGATACCATTCCTTTTTAGAACTCTTGAAAACTTAGATAATAAAACTAGCCTCCAAGCTAAGCAAGATGCTCTCCGAGCACTGTACAATCTTTCAATCTTCCCAACCAATGTCTCATTCATATTGGAAACAGATTTGGTTCCATTTCTGCTAAATGCAATAGGAGACATGGAAGTAAGCGAAAGAATCCTCTCAATCCTAAGTAATTTGGTTTCAACTCCAGAGGGTCGAAAAGCTATCAGCGCTGTACGTGATGCATTCCCAATTCTGGTTGATGTATTGAATTGGACTGATTCACCTGGATGCCAGGAAAAAGCTTCGTACATCTTGATGATTATGGCACACAAAGCCTATGGTGACAGGCATGCCATGATCGAAGCAGGGATTGTATCATCATTGCTTGAGTTGATGCTTCTGGGTACAGCGTTGGCACAGAAAAGGGCCTCAAGGATACTGGAATGTTTGAGTGGAAGCTTAAGTTCAACTATTTCTGCTCCTATATGTGGCTCTTCATCATCTTGTACCAAGTCAGATGGAGGTGGAAAGGAGTGtttggaggaggaagaagatatGATGAGTGATGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAAAGTTTGCAGAACAACATGAGGAAAATTGTGAAGAGGGCTAACTTGCCTCAGGATTTCGTTCCATCCGAGCATTTTAAGTCTCTCACTTCAAGTTCGACTTCAAAGAGCCTGCCATTTTGA 1500 0.4533 MAKYHRNNVGSLVLDHHDPTTNATVGGHFRIWNAFSASSIRRFLFDAVSCGGGSRHHRHRDNDFSSNDSTTTSSSGSSKDKSQEQMQEGSKSQPNPNAVRSEKLADLLNIAESEIDVQTKKKEKALEELKTIVKELQSEDLTKREMAAARVRLLAKEDSEVRGTFAMLGAIPPLVGMLDLEDVSSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPTAPDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLFRTLENLDNKTSLQAKQDALRALYNLSIFPTNVSFILETDLVPFLLNAIGDMEVSERILSILSNLVSTPEGRKAISAVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGDRHAMIEAGIVSSLLELMLLGTALAQKRASRILECLSGSLSSTISAPICGSSSSCTKSDGGGKECLEEEEDMMSDEKKAVKQLVQQSLQNNMRKIVKRANLPQDFVPSEHFKSLTSSSTSKSLPF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0904 499 SMART arm_5 331 370 IPR000225 GO:0005515
Sto5g0904 499 SMART arm_5 371 412 IPR000225 GO:0005515
Sto5g0904 499 SMART arm_5 244 288 IPR000225 GO:0005515
Sto5g0904 499 SMART arm_5 200 243 IPR000225 GO:0005515
Sto5g0904 499 SMART arm_5 289 327 IPR000225 GO:0005515
Sto5g0904 499 SMART arm_5 158 198 IPR000225 GO:0005515
Sto5g0904 499 Gene3D - 272 420 IPR011989 -
Sto5g0904 499 MobiDBLite consensus disorder prediction 66 99 - -
Sto5g0904 499 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 499 - -
Sto5g0904 499 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 499 - -
Sto5g0904 499 Coils Coil 108 139 - -
Sto5g0904 499 Coils Coil 437 460 - -
Sto5g0904 499 MobiDBLite consensus disorder prediction 51 99 - -
Sto5g0904 499 Gene3D - 59 271 IPR011989 -
Sto5g0904 499 SUPERFAMILY ARM repeat 128 411 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0904 Sto-Chr5 6085157 6087207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0904 147 411 U-box Gene Family AT3G46510 36.900 2.14e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0904 - - zju:107422474 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0904 5 6085157 6087207 Sto9g3353 9 33388407 33390347 CCT