Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0895 ATGCCTGCTTTCTCCCCAGGTACTCAGGTGGGAGAGAATCAACAAGACCATCCAACACATTCGCACAAGAAGATGATAATAGCGCTGGCCACTGCAAGTGCAGCACTTGGCCTACTCATTTTGTCCCTCTTGTGTTTCTGGATTTATAGTGCCAAGTATCCCTCCAAATCCAATAGGAAAAAGGTTCCAACCTCATCAGATGCTGAGAAAGGGCTCCCTCTAGCCCCATTCTTGAGTAAATTCAGCTCAATCAAGATGGTTGGGAAAAGAGGGTGTCTTCCAATCATTGATTATAAGCAGATAGAAAAAGGCACCAACAATTTCCGGGAAAGTAACATCTTGGGGGAGGGTGGATTTGGATGTGTTTACAAGGCTCAATTGGATGAGAATTTGGATGTTGCCGTCAAGAAACTACACTGTGAAACTCAGAATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTGAAATTCATCATCCCAATATCATTTCTGTACTGGGATGCAGCATTAATGACGACACCAGGTTCATCATCTACGAGTTGATGCAAAATGGATCTCTGGAAACTCAATTACATGGACCTTCCCATGGTGCAGCATTGAGTTGGCATATGAGAATGAAAATTGCTCTTGATACAGCAAGAGGATTAGAATATCTGCATGAGCACCACAAGCCTGCGGTGATTCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCAAACTTCAACGCCAAGCTTTCTGATTTTGGTCTAGCCATAAAGGATGGGTCCCAAAGCAAGAATAACATAAAGCTATCAGGAACGTTGGGTTACGTAGCCCCGGAGTATCTTCTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTACTACTTGAGCTTCTATTAGGCAAGAGGCCCGTGGAGAAACTGGCACCATCGCAGTGCCAATCCCTCGCCATGCCACAGCTGACGGACAGATCAAAGCTTCCAAACATTGTGGATGCAGTGATTAAGAATTCAATGGATCTGAAGCATTTATACCAGGTTGCAGCTGTTGCTGTGCTATGCGTACAACCAGAACCAAGTTATCGGCCTCTGATTACAGATGTTCTGCACTCCCTCATCCCTCTTGTTCCAGTTGAGCTTGGAGGAACACTCAGACTCCAACAAGTGACACACACACAAGAATCATAG 1197 0.4369 MPAFSPGTQVGENQQDHPTHSHKKMIIALATASAALGLLILSLLCFWIYSAKYPSKSNRKKVPTSSDAEKGLPLAPFLSKFSSIKMVGKRGCLPIIDYKQIEKGTNNFRESNILGEGGFGCVYKAQLDENLDVAVKKLHCETQNAEREFENEVDLLSEIHHPNIISVLGCSINDDTRFIIYELMQNGSLETQLHGPSHGAALSWHMRMKIALDTARGLEYLHEHHKPAVIHRDLKSSNILLDANFNAKLSDFGLAIKDGSQSKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKRPVEKLAPSQCQSLAMPQLTDRSKLPNIVDAVIKNSMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRLQQVTHTQES 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0895 398 PANTHER BNAA04G14780D PROTEIN 14 394 - -
Sto5g0895 398 ProSiteProfiles Protein kinase domain profile. 108 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0895 398 SUPERFAMILY Protein kinase-like (PK-like) 88 375 IPR011009 -
Sto5g0895 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Sto5g0895 398 Gene3D Transferase(Phosphotransferase) domain 1 184 380 - -
Sto5g0895 398 Gene3D Phosphorylase Kinase; domain 1 78 183 - -
Sto5g0895 398 Pfam Protein tyrosine and serine/threonine kinase 111 372 IPR001245 GO:0004672|GO:0006468
Sto5g0895 398 PANTHER OS01G0750732 PROTEIN 14 394 - -
Sto5g0895 398 SMART serkin_6 108 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0895 398 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0895 Sto-Chr5 5997990 6000451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0895 22 310 Receptor kinase-like Gene Family AT1G80640 50.342 3.48e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Sto5g0895 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0895 - - gmx:100812044 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0895 5 5997990 6000451 Sto9g3338 9 33293182 33296006 CCT