Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0885 ATGGGGAAGCCCACCGGTAAGAAGAAGGATGCTGGGTCTGTAACTCTAACCCAGAAGGCTGCAAATGCAAACAGCAAGTTGAGCAAGCCCTCTGAGAGGGCTTCCAAAGCTTTTGACGAAGACACTGCAGTCTTCATCAACTTGTCACAAGATCTCAAGGAAGAAGGCAACAAACTCTTTCAGAAGAGGGACCACGAAGGTGCTATGCTGAAGTATGAAAAGGCCCTCAATCTCCTTCCCGGAAACCACATAGATGTGGCACACTTACGTACCAATATGGCTGCGTGTTATATGCAACTGGGTCTCGGAGAGTATCCTCGAGCAATTAACCAATGTAATTTAGCACTTGAAGTATCACCCAAATATAGTAAGGCTCTGTTAAGAAGAGCAAAGTGCTATGAAGCATTGAATCGATTCGATTTGGCATTGAGAGATGTTAATTTCGTTTTGAGTGTGGAGCCTAATAATCTTAATGCATTGGAGATTCTCGACAGTTTGAAGAAGACCATGGAAGAAAAAGGCATCACTGTTGACGAGAAGGAGATTAGTTTGGCCATTGCAGAGCGGCCTCCCACTGCTCCAATGCGTAAAGTGGTTAGGGAGAaactaaagaaaaagaaaaataaaaaaactgaggACAAGGCAGAGGTTAAGTTGGTTATTGAGGAGAATGTTAAAGCTGTTAAAGATAAAGAAGTGGTGGCAAAGTCAATTGAAGAAAAAGTGGTCACAAGGACAGTGAAGTTGGTATTTGGAGAGGATATAAGGTGGGCGCAATTGCCAGGGAATTGTAGTATGAGGTTGGTGAGGGATATAATTAGGGATCGATTTCCAGGCTTGAAGGGTGTTCTTGTGAAATATAGGGATCAAGAAGGAGATTTGGTTACTATCACTACTACCGATGAATTAAGATTCGTCGAATCTTTAGGCGATGTGCCGGGCTCACTTCGGCTCTATATTACAGAAGTCAATCCAGACCAAGAACCATCTTATGATGGAATAACCAATGGGAATGAGATGGGAGATGATGGTATTGAGCATGGGGCTGTGGAAGAAAGCAAAGGATTAGCAAATGGGATGACCACTGTGGAGGATTGGCTAATCCAGTTTGCAAGGCTGTTCAAGAACCATGTTGGGTTTGGTTCTGATACGTATTTGGATATTCATGAGGTGGGAATGAAGCTGTATTCAGAAGCATTGGAGGATGTGATAACAAGTGATGATGCTCAAGAACTTTTTGAAATTGCTGCAGATAAATTTCAAGAGATGGCAGCTTTGGCATTATTTAATTGGGGGAATGTTCACATGTCCAGGGCAAGGAAGAGGGTTTTCTTTTCAGAGGATGGGTCAAGGGAATCTGCTTTTGAGTGTCTTAAAGCTGCATATGAGTGGGCACAGAAGGAGTACATTAAAGCAGAAAAGAAATATGAGGAAGCGTTGAAAATCAAACCAGACTTCTATGAAGGATATCTTGCTCTTGGACATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTATTATGCAATGGCATGCAAGATGGATTTAGAAGATGGCCCTTCCAATGAGGTTTTACAGCTCTATAACAAGGCAGAGGACAGCATGGAGAGAGGCATGTTGATGTGGGAGGAGATTGAGGAGCAGCGTTTAAATGGACTGTCCAAATTAGATAAATATAAATTGAAGTTGGAAAAAATGGGTTTAGATAGTCTTCTCAAGGATGTTTCTTCTGATGAAGCTGCAGAGCAGGCTGCAAACATGAGGTCACAAATATACCTTTTATGGGGTACCTTATTGTATGAGCGTTCTGTTGTGGAGTACAAGATACACTTACCAACTTGGGAGGAATGTTTGGAGGTCGCAGTTGAAAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGGAGTCATGATAAAGAATCATTGTTCCAATCAAACAGCACTAGAAGGGTTCAAAATTGATGAGATAGTACAGGCATGGAATGAAATGTACGATGCCCAGAGGTGGCAGTTTGATGTACCATCATTCCGACTTGAACCATTGTTTCGTCGCCGTGTTCCAAAACTTCATGACATTTTGGAGCATTTTTAA 2091 0.4185 MGKPTGKKKDAGSVTLTQKAANANSKLSKPSERASKAFDEDTAVFINLSQDLKEEGNKLFQKRDHEGAMLKYEKALNLLPGNHIDVAHLRTNMAACYMQLGLGEYPRAINQCNLALEVSPKYSKALLRRAKCYEALNRFDLALRDVNFVLSVEPNNLNALEILDSLKKTMEEKGITVDEKEISLAIAERPPTAPMRKVVREKLKKKKNKKTEDKAEVKLVIEENVKAVKDKEVVAKSIEEKVVTRTVKLVFGEDIRWAQLPGNCSMRLVRDIIRDRFPGLKGVLVKYRDQEGDLVTITTTDELRFVESLGDVPGSLRLYITEVNPDQEPSYDGITNGNEMGDDGIEHGAVEESKGLANGMTTVEDWLIQFARLFKNHVGFGSDTYLDIHEVGMKLYSEALEDVITSDDAQELFEIAADKFQEMAALALFNWGNVHMSRARKRVFFSEDGSRESAFECLKAAYEWAQKEYIKAEKKYEEALKIKPDFYEGYLALGHQQFEQAKLCWYYAMACKMDLEDGPSNEVLQLYNKAEDSMERGMLMWEEIEEQRLNGLSKLDKYKLKLEKMGLDSLLKDVSSDEAAEQAANMRSQIYLLWGTLLYERSVVEYKIHLPTWEECLEVAVEKFELAGASPTDIGVMIKNHCSNQTALEGFKIDEIVQAWNEMYDAQRWQFDVPSFRLEPLFRRRVPKLHDILEHF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0885 696 CDD PB1 246 320 - -
Sto5g0885 696 PANTHER PROTEIN PHOX4 1 696 - -
Sto5g0885 696 Gene3D - 243 312 - -
Sto5g0885 696 Gene3D Tetratricopeptide repeat domain 390 619 IPR011990 GO:0005515
Sto5g0885 696 MobiDBLite consensus disorder prediction 11 31 - -
Sto5g0885 696 SMART tpr_5 453 486 IPR019734 GO:0005515
Sto5g0885 696 SMART tpr_5 87 122 IPR019734 GO:0005515
Sto5g0885 696 SMART tpr_5 123 156 IPR019734 GO:0005515
Sto5g0885 696 SMART tpr_5 49 82 IPR019734 GO:0005515
Sto5g0885 696 SMART PB1_new 244 323 IPR000270 GO:0005515
Sto5g0885 696 SUPERFAMILY CAD & PB1 domains 239 332 - -
Sto5g0885 696 Gene3D Tetratricopeptide repeat domain 47 177 IPR011990 GO:0005515
Sto5g0885 696 Pfam PB1 domain 244 320 IPR000270 GO:0005515
Sto5g0885 696 PANTHER PROTEIN CLMP1 1 696 IPR044517 -
Sto5g0885 696 SUPERFAMILY TPR-like 421 622 IPR011990 GO:0005515
Sto5g0885 696 MobiDBLite consensus disorder prediction 1 36 - -
Sto5g0885 696 ProSiteProfiles TPR repeat profile. 49 82 IPR019734 GO:0005515
Sto5g0885 696 ProSiteProfiles TPR repeat profile. 123 156 IPR019734 GO:0005515
Sto5g0885 696 ProSiteProfiles PB1 domain profile. 244 323 IPR000270 GO:0005515
Sto5g0885 696 SUPERFAMILY TPR-like 41 168 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0885 Sto-Chr5 5916991 5919212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0885 32 172 Calmodulin-binding Proteins AT3G25230 31.373 1.78e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0885 - - jre:109002799 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0885 5 5916991 5919212 Sto9g3328 9 33223101 33225378 CCT