Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0873 ATGTTTGCGGAAGAGAATGGTCTGAAGGGAGACCCGAGGCTGCAAGCTATTTCAGAAGCCATTAGAGTGGTGCCTCACTTTCCAAAGcaagGAATCATGTTTCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTCAAAGACACTGTCGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCCGTTGTTGCCGGAGTTGAAGCTCGAGGATTCATGTTTGGTCCCTCAATTGCGTTGGGCATTGGTGCAAAGTTTATTCCTTTACGCAAGCCTCGCAAGCTgccaggtGAAGTGATATCAGAAAAATATGTTCTTGAATATGGAACTGATTGTTTGGAGATGCATGTTGGGGCTGTCCAGCCTGGTGAAAGGGCCTTAGTTATTGACGATTTGGTGGCTACTGGTGGCACTCTCTCTGCTGCAATAAGACTACTAGAACGCGTCGGTGCCGAAGTTGTTGAATGTGCTTGTGTGATTGGTGTGCCTGAGGTTAAGaTAATACGAGTAGAAACAATtttcttgttatatatatatatatatatatattttaaaactcgTGTTTCAGGGACACTGCAGGCTAGTTGGAAAGCCACTGTATGTCCTTGTGGAGCCGCGTCAAATCGATAA 636 0.4182 MFAEENGLKGDPRLQAISEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMDISVVAGVEARGFMFGPSIALGIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAIRLLERVGAEVVECACVIGVPEVKIIRVETIFLLYIYIYIYFKTRVSGTLQASWKATVCPCGAASNR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0873 211 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 172 - -
Sto5g0873 211 TIGRFAM apt: adenine phosphoribosyltransferase 18 168 IPR005764 GO:0003999|GO:0005737|GO:0006168
Sto5g0873 211 Pfam Phosphoribosyl transferase domain 56 165 IPR000836 -
Sto5g0873 211 Hamap Adenine phosphoribosyltransferase [apt]. 17 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Sto5g0873 211 Gene3D - 6 177 IPR029057 -
Sto5g0873 211 CDD PRTases_typeI 51 166 IPR000836 -
Sto5g0873 211 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 172 - -
Sto5g0873 211 SUPERFAMILY PRTase-like 20 166 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0873 Sto-Chr5 5823477 5825299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0873 11 168 PRT Gene Family AT1G27450 75.316 3.71e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0873 K00759 - nnu:104586127 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0873 5 5823477 5825299 Sto9g3315 9 33147739 33149112 CCT
Sto5g0873 5 5823477 5825299 Sto5g0873 5 5823477 5825299 ECH
Sto5g0873 5 5823477 5825299 Sto9g3315 9 33147739 33149112 ECH