Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0871 ATGGCTAAAGAAGTCATTGCTACTCCGCCGACATCTTCTTTCGATGAGTATGAGCTATTGGGAGATGATCCTGAGAACTTTAGAACTGTCAAAGCCTCATCCAACAGCTCAAGTCCATGGATTGAACCTGAAAGATTGAAACTTAGGCACAGAATTGGCCGGGGACCCTTTGGTGATGTTTGGTTGGCAACTCATCATCAGTCAACTGCAGATTATGATGAGTACCATGAAGTTGCTGCCAAGATGTTATATCCAATCAAAGAGGATCATATGAAGATTGTATTAGAGAAATTTGATGATTTATATTTTAAGTGCCAAGGAGTGGCTGGGGCTTGCTGGCTGCACGGAATTTCAGTTTTAAGTGGAAGGATATGCATCATCATGAATTTCTATGAGGGTTCTGTTGGTGATAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCATTGCATGATGTGTTGAGGTATGGGATCAATTTGGCTCAAGGTATTCTGGAACTTCATTCAAAAGGGATCCAAATTCTCAACCTTAAACCATTTAATGTACTTCTTGACAATAATGACCAAGCAGTTTTGGGAGATTTTGGTATTCCCAATCTTCTGCTTGGCTCTTCATTCCCTAGCTCAGATATGGCTCACAGGCATGGGACTCCAAATTACATGGCTCCAGAACAATGGCAACCTGAAGTCAGAGGCCCTATATCCTTTGAGACAGATTCGTGGGGATTTGGGTGCACAGTTGTGGAAATGCTGACTGGTAATCAACCTTGGTATGGGAGATCTGTGGGTGAAATATATCAGTTAGTAGCTATAAAGCACGAAAAACCTCTTATTCCAAGTGGCCTTCCTTCTCCAATTGAGAATATCCTCAGAGGATGCTTTGAGTATGATTTAAGGAATCGTCCTTTAATGGCAGACATTCTAAGCATATTTAAAAGCTCTCTGGATGCGTTAGCTGATGATGGAGGATGGAAGTATCTTGGAACTATGAGAGATGCTGAAAAATCAAGTAGCACCGGCTATACTGATTGGTATCTTTCAAAGGATCGTCTTCAAGTGAATGACATGGTTAGATCTAGAAAACCGACCAAATCATGCAAAACTCAAAACATGGAAGTTCCTGAAGGAACTGTTGTTGGTTTAGAACGTAGTGCAGATCACGGTTTTGTTTTAGTGAGGATTCACGGTATTCATGACCCTGTAAGGATTCATACTTCTACTCTGGAACGTGTCACATCTGGTTTGGCAGCCGGTGATTGGGTACGCTTGAAGGAAGAAAACGAGAAGCACTCGCCGGTGGGTATTCTACATTCCATCAGTCGTGATGGTAGAGTGGCTGTTGGATTCATTAGTCTGCAGACTCTTTGGATAGGAAATTCTTCAGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAGTTTGTTAGACTTAAAGTCAATGTTTTGAGTCCTCGATTCGAATGGCCTCGTAAAAGGGGAGGGATCTGGGCTACAGGAAGGATATCATGGATCCTACCAAATGGGTGTCTAGTTGTCAAATTCCCTGGGATTTTGACTTTGGGGGATGAATCAAGCACCTTCTTAGCTGATCCATCCGAGGTTGAAGTggttaattttaatacttgcCCTGGGATGGTAGAGAAGTATCAACATATAGAGGATCATCATTGGTTAGTTAGACCTGCCCTAATTGCATTTGGCCTGTTCACAGCTTTGAAACTAGGCATATCCATTGGAAACAAAGTGGGGAGAAATATGAAGAAGGTGAATGCAAAAGAGAGCGAAAGTCAATATATAGATGGCCAGAATGCTAGCAACTCTACTTGGAGATCTTCCGGTGCTATAAATCCTGGAAACACAGCATGGGTTCCTTCCGTTGCTAATATTCTTTTCAGAGAAGGTGTTAACTAA 1908 0.4188 MAKEVIATPPTSSFDEYELLGDDPENFRTVKASSNSSSPWIEPERLKLRHRIGRGPFGDVWLATHHQSTADYDEYHEVAAKMLYPIKEDHMKIVLEKFDDLYFKCQGVAGACWLHGISVLSGRICIIMNFYEGSVGDKMARLREGRISLHDVLRYGINLAQGILELHSKGIQILNLKPFNVLLDNNDQAVLGDFGIPNLLLGSSFPSSDMAHRHGTPNYMAPEQWQPEVRGPISFETDSWGFGCTVVEMLTGNQPWYGRSVGEIYQLVAIKHEKPLIPSGLPSPIENILRGCFEYDLRNRPLMADILSIFKSSLDALADDGGWKYLGTMRDAEKSSSTGYTDWYLSKDRLQVNDMVRSRKPTKSCKTQNMEVPEGTVVGLERSADHGFVLVRIHGIHDPVRIHTSTLERVTSGLAAGDWVRLKEENEKHSPVGILHSISRDGRVAVGFISLQTLWIGNSSELEMAESYCVGQFVRLKVNVLSPRFEWPRKRGGIWATGRISWILPNGCLVVKFPGILTLGDESSTFLADPSEVEVVNFNTCPGMVEKYQHIEDHHWLVRPALIAFGLFTALKLGISIGNKVGRNMKKVNAKESESQYIDGQNASNSTWRSSGAINPGNTAWVPSVANILFREGVN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0871 635 ProSiteProfiles Protein kinase domain profile. 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0871 635 PANTHER OS06G0639500 PROTEIN 1 634 - -
Sto5g0871 635 Pfam Protein tyrosine and serine/threonine kinase 46 308 IPR001245 GO:0004672|GO:0006468
Sto5g0871 635 CDD STKc_PknB_like 47 305 - -
Sto5g0871 635 PANTHER OS06G0639500 PROTEIN 1 634 - -
Sto5g0871 635 SUPERFAMILY Protein kinase-like (PK-like) 40 312 IPR011009 -
Sto5g0871 635 Gene3D Phosphorylase Kinase; domain 1 25 105 - -
Sto5g0871 635 Gene3D Transferase(Phosphotransferase) domain 1 132 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0871 Sto-Chr5 5813263 5816262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0871 126 307 MAP Kinase Kinase Kinase AT4G26890 27.717 6.97e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Sto5g0871 PK_Tyr_Ser-Thr 2.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0871 - - gsj:114393396 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0871 5 5813263 5816262 Sto5g0871 5 5813263 5816262 ECH