Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0858 ctgtgtttttcttttcttcttttgccTCAAATCTGCCAGGCTGGCGTTCAAAGCATCGGTATGATCTTTCCAGGGTTTCGAGGCTCTCAAATGAATTGGATTGACAAAAACGGCATGTTTCTGCTCTCAAACGACGGAGAATTCACCTTCGGTTTCATTACTACTCAAAACGACACCACATTGTTTCTACTTGTAATCGTCCACGCCAGCACTTCCAAAGTCGTTTGGACAGCGAACAGAGGAGTTCCTGTGAGTAATTCTGATAGCTTTGCGTTTGATGAAACGGGTAATGCTTTGTTACAGAAAGGAGGCACTGTCGTTTGGTCTACAAATACAAAGGGCAAAGGAGCTTCTTCAATGGCATTACGTGACACAGGAAATTTGGTTTTACTGGGAAACGACAATAGTACCATAATCTGGCAGAGTTTTAGCCATCCCACGGATACCTTATTGCCTACGCAGGAATTCACAGAGGGAATGAAACTCATTAGTGAACCTACACGCAATAACTTGACCTACGTTCTTGAGATTAAATCTGGTGATCTGCTTCTCTCGGCTGGGTTTCAAAATCCCCAGCCTTATTGGTCTATGCAGAAAGATAGCCGCAAAATCATCAATAAAGATGGTGACGCCGTGGCTTCGGCTTCCCTTAGTGAAAATTCCTGGAGGTTGTATGAAaaaagtgggggattgttatgGCAGTTCATTTTTGCTCAAGATTCGTCAGGCAAAAATTCAACTTGGGTTGCTGTTCTGGGAAGTGATGGTTTCATCACTTTCTCTGATCTCAATAGTGGAGATTCAAATGGTGCTTCACCAACAAGAATACCACAAGATTCTTGCAGTACCCCAGAGCCTTGTGATGCTTATTACATATGCTCAGGTGATAACAAATGTCGATGTCCTTCTGTTCTTAGCTCTCATCCCAATTGTAAGCCAGGGGTTGTCTCTACTTGTAATGGTGGCTCCAAGAATTCTGTAGAGCTCGTGAAAGCAGATGATGGACTCAATTACTTCGCGCTTGGATTCCTTCCACCATCTTCCAAAACCGATTTGAATGGATGCAAAACTTCCTGTTTAGGAAACTGTTCATGTCTTGCTATGTTCTTTCACAGCAGTTCAGGAAACTGTTTCCTTTTGGAAGATATAGGAAGCTTCCAGAATTCTGACACAGATTCTGGTTTTGTTTCTTACATTAAGGTTGGATCAGGCAGCACTGGTGGCGGTGGAGGTGGCAGTAAGCATACTGTGGTTGTTCTGGTTATTGTCATAACAACGTTGGTTGTCATTTTTGGTCTGATCTATGTGGGATTTCGATACTACAGGAGAAAGCAAAAACTGCCCGAGTCTCCTAGAGGGAGTTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGGAATGCCAATCCGTTTCAGCTACAAAGATCTGGAAACAGCCACTAGAAACTTCTCTGAGAAGCTTGGGCATGGAGGGTTTGGGTCAGTTTATAAAGGAGTTTTGACAGATGGGACTCTAGTAGCTGTGAAGAAGCTGGAAGGCATAGGGCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATCGGTAGCATTCATCATCTCCACTTGGTGAGGCTGAAAGGATTCTGTGCTGAAGGAACACATAGGCTCCTTGCTTATGAGTATATGGCAAATGGCTCATTGGACAAATGGATATTCAAGAAGAACAAAGGAGAATTTCTATTGGACTGGGATACCAGGTTCAATATAGCTCTTGGAACAGCAAAAGGTCTGGCTTACCTGCACGAAGATTGTGATTCAAAGATTGTTCATTGCGACATCAAACCCGAAAATGTGCTTCTTGATGATAACTTCTCAGCCAAAGTTTCGGATTTTGGCTTGGCTAAGCTCATGACTCGCGAGCAGAGTCATGTTTTCACAACGCTAAGGGGAACCAGGGGGTATCTGGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTGTACAGCTTTGGGATGGTGTTGCTGGAGATCATAGGAGGAAGGAAAAACTATGATCCTAATGAGAGTTCAGAGAAATCCCATTTCCCATCTTATGCTTTCAAGATGATGGAAGAAGGGAAGTTGCGAGATATTCTTGATTCCAAGTTGAGATTAGATGAAAATGATGAAAGGTTTCATATTGCCATCAAAGTAGCATTGTGGTGCATACAGGAAGACATGTCTCTAAGGCCCTCCATGACCAAAGTGGTTCAAATGCTTGAGGGCCTCTGTACTGTTCCTAAGCCACCATCCGGTTCTCCACTAGGTTCTCGCCTTTACTCATCTTTATTCAAATCTATGACCATAAGCGAAGGTGGCACCTCTTCAGCACCATCAGACTGTAATAGTGATGCTTATCTCTCTGCAGTTCGTCTTTCAGGACCAAGATAA 2424 0.4257 LCFSFLLLPQICQAGVQSIGMIFPGFRGSQMNWIDKNGMFLLSNDGEFTFGFITTQNDTTLFLLVIVHASTSKVVWTANRGVPVSNSDSFAFDETGNALLQKGGTVVWSTNTKGKGASSMALRDTGNLVLLGNDNSTIIWQSFSHPTDTLLPTQEFTEGMKLISEPTRNNLTYVLEIKSGDLLLSAGFQNPQPYWSMQKDSRKIINKDGDAVASASLSENSWRLYEKSGGLLWQFIFAQDSSGKNSTWVAVLGSDGFITFSDLNSGDSNGASPTRIPQDSCSTPEPCDAYYICSGDNKCRCPSVLSSHPNCKPGVVSTCNGGSKNSVELVKADDGLNYFALGFLPPSSKTDLNGCKTSCLGNCSCLAMFFHSSSGNCFLLEDIGSFQNSDTDSGFVSYIKVGSGSTGGGGGGSKHTVVVLVIVITTLVVIFGLIYVGFRYYRRKQKLPESPRGSSEEDNFLENLTGMPIRFSYKDLETATRNFSEKLGHGGFGSVYKGVLTDGTLVAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEYMANGSLDKWIFKKNKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDNFSAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSFGMVLLEIIGGRKNYDPNESSEKSHFPSYAFKMMEEGKLRDILDSKLRLDENDERFHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPSGSPLGSRLYSSLFKSMTISEGGTSSAPSDCNSDAYLSAVRLSGPR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0858 807 CDD PAN_AP_plant 315 401 - -
Sto5g0858 807 Gene3D Phosphorylase Kinase; domain 1 449 555 - -
Sto5g0858 807 PIRSF SRK 1 802 IPR024171 GO:0004674
Sto5g0858 807 ProSiteProfiles Protein kinase domain profile. 481 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0858 807 CDD B_lectin 34 146 IPR001480 -
Sto5g0858 807 Pfam Protein kinase domain 484 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0858 807 ProSitePatterns Protein kinases ATP-binding region signature. 487 510 IPR017441 GO:0005524
Sto5g0858 807 ProSiteProfiles Bulb-type lectin domain profile. 26 143 IPR001480 -
Sto5g0858 807 SUPERFAMILY Protein kinase-like (PK-like) 463 752 IPR011009 -
Sto5g0858 807 Gene3D - 32 145 IPR036426 -
Sto5g0858 807 Gene3D Transferase(Phosphotransferase) domain 1 556 759 - -
Sto5g0858 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 197 IPR036426 -
Sto5g0858 807 SMART serkin_6 481 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0858 807 SMART blect_4 32 146 IPR001480 -
Sto5g0858 807 Pfam D-mannose binding lectin 74 156 IPR001480 -
Sto5g0858 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 807 - -
Sto5g0858 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Sto5g0858 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 807 - -
Sto5g0858 807 CDD STKc_IRAK 487 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0858 Sto-Chr5 5749828 5752251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0858 424 761 Receptor kinase-like Gene Family AT5G20050 45.278 3.77e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto5g0858 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0858 - - gmx:100791158 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0858 5 5749828 5752251 Sto9g3310 9 33122331 33124742 CCT
Sto5g0858 5 5749828 5752251 Sto5g0858 5 5749828 5752251 ECH
Sto5g0858 5 5749828 5752251 Sto9g3310 9 33122331 33124742 ECH