Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0857 ATGACTTCAATCTTCTCCCTCCCTAACCACTCTCTACTTTGCTCCACTGTTTCCACTCCCTTCTCCGAAATCAGTTTTCCCGCCAAATCACAACGGCCGTCTTCATCAACGGTCAAATTTCGCTCACACAAGGCCGACGAGTTCGTTTCATCAGGTCAAATTGGCGCATCCGATTCAACTACCAGAAGGAGAGAGCTCCTGTTTATAGCCACACTACCATGTCTTCTTCCCTTAACTCAAATCATGGATTCTCAAGGAGCAAACGCGGTCGAGCCGGTTACAGAGGAATATCTGCTCATAAAAGAAGAGATCAGCAAGGTATTATCAAAAGGAAAGGCAGCAGGTGTGCTTCGTTTGGTTTTCCATGACGCTGGGACATTTGAAATGGATGATAGTACAGGTGGTATGAATGGTTCTATAGTCAATGAACTTGAAAGACCTGAAAATGCTGGACTGAAAAAACCTATAAAGGTAATCcggttcatttttctttcttcagtTATTATTCTGCAGAAAGCAAAGACTCAAATAGACGCTATCAGACCAGTATCCTGGGCGGACATAATTGCTATGGCTGGAGCTGAAGCAGTTGCAGTATGTGGAGGTCCAAAAATCCAAGTTTCACTGGGCAGGCTAGATTTGTTGGAGCCTGATCCTGAAGGGAAACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTAAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACTCAAGAACTTGTAGCATTATCAGGAGCCCACACTATTGGAAGTAAAGGTTTTGGAAATCCAATTTCTTTTGACAATGCATATTATAAGGTTCTTTTGGAGAAGCCATGGATGTCTTCAGGTGGTATGTCAAGTATGGTTGGCCTTCCTTCCGATCACGCACTTGTTGAAGATGATGAATGTTTAAGATGGATTAAAAAATACGCGGACAATGAGAATATGTTCTTTGAAGATTTCAAGAACGCGTATGTCAAGCTGGTGAATTCTGGTGTGAAGTGGAAAAGCTTATAG 1020 0.4167 MTSIFSLPNHSLLCSTVSTPFSEISFPAKSQRPSSSTVKFRSHKADEFVSSGQIGASDSTTRRRELLFIATLPCLLPLTQIMDSQGANAVEPVTEEYLLIKEEISKVLSKGKAAGVLRLVFHDAGTFEMDDSTGGMNGSIVNELERPENAGLKKPIKVIRFIFLSSVIILQKAKTQIDAIRPVSWADIIAMAGAEAVAVCGGPKIQVSLGRLDLLEPDPEGKLPEESLNASGLKKCFQRKGFSTQELVALSGAHTIGSKGFGNPISFDNAYYKVLLEKPWMSSGGMSSMVGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVKWKSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0857 339 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 22 337 - -
Sto5g0857 339 PRINTS Plant peroxidase signature 115 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Plant peroxidase signature 182 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Plant peroxidase signature 201 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Plant peroxidase signature 245 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 Gene3D Peroxidase, domain 2 224 326 - -
Sto5g0857 339 SUPERFAMILY Heme-dependent peroxidases 103 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Haem peroxidase superfamily signature 201 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 246 256 IPR019793 -
Sto5g0857 339 Pfam Peroxidase 105 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 ProSiteProfiles Plant heme peroxidase family profile. 113 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto5g0857 339 ProSitePatterns Peroxidases active site signature. 113 124 IPR019794 GO:0004601
Sto5g0857 339 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 22 337 IPR044831 GO:0004601|GO:0034599
Sto5g0857 339 Gene3D - 101 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0857 Sto-Chr5 5745493 5748857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0857 99 335 Peroxidase AT5G47000 29.617 3.38e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0857 K00434 - gmx:100792735 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0857 5 5745493 5748857 Sto5g0857 5 5745493 5748857 ECH