Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0849 ATGAATGAAGGACGAAACAAAGAATTACAAGACAGCATTCAAAagACAAGCTCAAGCACTAAGACTAGCCACATAACTACTTTCTCCTTCGCTTCCTTTAGCCCTGGAAGTTGCAGCAATGGTGAACTATTGTGTATGGGTTCTGCAGCCACATCAGGGGAAGGCTATATAAATCTCACTCCAGACCCAAGTAATTCATCTTCCACTACCAACCAAATAGGGAGGGTTTTGTACCCTCAAAGAGTCCCAGTTTGGCCTGCACTCATCACCACCACCTTCACCATTAGAATCACTCCTATGCCTAATTCCACTTCCTCTGGTGATGGAATTACTTTCCTTCTTGCACAAGATAACAATCCCTCCCCACCTCAAAGCTATGGCGCTTATCTTGGCTTATTTGAAAAGTCCCCTCAAGTTGAGTTCCTACAACAAATAGCTGTGGAGTTTGACACATTCATGAACGAGTTTGATCCAGATGGGAACCACATTGGGATAGACACAAGAAGCATAGTAACTCCTGTTGCTGCAGTGAGTCTCAACGACTCTGGGATTCAACTCACAAGTGGAAGAGACATTGAGGTTCAAATAGACTATGATGGCTCAGATAATACACTCTATGTCTCTATGGGATACTCTAGAACACAGTTAAAGACCATTCTTAACCAATCAATTGAGTTGTCAAACATAGTACCAAGTGCTGCTTATGTTGGTTTCACAGCCTCCACTGGCAGTGCTTTGCCTGAAAGCCATCAAGTTCTGAATTGGGTATTTACATCAGTGCCATTGCCTTTAGCTTCTGGTAAAACCAGTAAAGAAGATACCTTGAAGACTATATTGGTCATTGTGATACCCATTTTGGGGGTGGCGTTTATAAGCTCTGTTCCATTTATTTGGGAAGTTGTGAAGAGGGGAGGAGAGAAAGGTAAGAAGGAAGAGGATATAGAAAGCTTGTCAAGGAGATCAGGTGCGGATATGCCTAAGGAATTCACTTTCAAGCAATTGTCAAAGGCTACTTGCAAGTTTAGCAAGGACAATCTTTTAGGAAGAGGTGGTTTTGGTTGTGTCTATAAAGGCTTTCTAACTGATCCTAAAAGAACCATAGCTGTCAAGAAGATCTCAGCAACCTCTAAACAAGGACTCGCATCAGCATTACTTTACCTTCATGAGGAGTGTGGTAGTCCTATGGTTCATAGAGACGTCAAGCCCAACAACGTAATGCTGGACTCCAATTACAATCCTCAATTAGGAGATTTTGGGCTTGCAAGATTGCTCCATAATGACGAATCAGTACTCACCAATCTCATTGGAACTCCTGGATATTTGGCCCCGGAAATAGGCTTCACAGGGAAAGCCACCCCAGAATCAGATGTGTACAGTTTCGGAATAGTGATGCTTGAAGTGATATGTGGGAAGAGATCAATTAGTATGGTTGAGAATGGGTTGGTGGACTATGTTTGGGACATGTATTTGGGAAATACATTGCTTGAGTGCGTTGACAATAAACTAATGAGACAGCAATTGGATGAAGAAGAGGCTAAAAGGGCTTTGATGGTTGGGCTGGCTTGTTCGCACCCAAACTCAATGCTTAGGCCCAAGATGAGAAAAGTGGTGCACATTTTGTTGAACCGTAGTGAGCCTCTTATGGAATTGCCAAAAGAAAGACCTACTGGAGTTTATATGTTGGTGCCTTCGTCTTCAGCAATTACTAACTTGGGCGCCGCATGTTGTGCGGATCGGCATCCATTGCTTCAAACAACCGCAACATCTTTGGATGAAATCTCTATAGTTTATGATCAACCGTGA 1803 0.4282 MNEGRNKELQDSIQKTSSSTKTSHITTFSFASFSPGSCSNGELLCMGSAATSGEGYINLTPDPSNSSSTTNQIGRVLYPQRVPVWPALITTTFTIRITPMPNSTSSGDGITFLLAQDNNPSPPQSYGAYLGLFEKSPQVEFLQQIAVEFDTFMNEFDPDGNHIGIDTRSIVTPVAAVSLNDSGIQLTSGRDIEVQIDYDGSDNTLYVSMGYSRTQLKTILNQSIELSNIVPSAAYVGFTASTGSALPESHQVLNWVFTSVPLPLASGKTSKEDTLKTILVIVIPILGVAFISSVPFIWEVVKRGGEKGKKEEDIESLSRRSGADMPKEFTFKQLSKATCKFSKDNLLGRGGFGCVYKGFLTDPKRTIAVKKISATSKQGLASALLYLHEECGSPMVHRDVKPNNVMLDSNYNPQLGDFGLARLLHNDESVLTNLIGTPGYLAPEIGFTGKATPESDVYSFGIVMLEVICGKRSISMVENGLVDYVWDMYLGNTLLECVDNKLMRQQLDEEEAKRALMVGLACSHPNSMLRPKMRKVVHILLNRSEPLMELPKERPTGVYMLVPSSSAITNLGAACCADRHPLLQTTATSLDEISIVYDQP 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0849 600 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Sto5g0849 600 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 29 379 - -
Sto5g0849 600 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 378 563 - -
Sto5g0849 600 ProSiteProfiles Protein kinase domain profile. 258 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0849 600 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 260 IPR013320 -
Sto5g0849 600 Gene3D - 24 278 - -
Sto5g0849 600 SUPERFAMILY Protein kinase-like (PK-like) 325 552 IPR011009 -
Sto5g0849 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Sto5g0849 600 SMART serkin_6 341 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0849 600 PANTHER - 378 563 - -
Sto5g0849 600 PANTHER - 29 379 - -
Sto5g0849 600 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Sto5g0849 600 Gene3D Transferase(Phosphotransferase) domain 1 360 552 - -
Sto5g0849 600 CDD lectin_legume_LecRK_Arcelin_ConA 26 259 IPR001220 GO:0030246
Sto5g0849 600 Pfam Protein kinase domain 380 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0849 600 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0849 Sto-Chr5 5682772 5685353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0849 28 561 Receptor kinase-like Gene Family AT5G65600 29.688 5.29e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto5g0849 Lectin_legB 2.7e-49 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0849 - - ccaj:109810929 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0849 5 5682772 5685353 Sto5g0849 5 5682772 5685353 ECH