Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0844 atGAGGCACTTACTCTTAGCCCTCGCATTATTCTTGTCAAGCCTGGTGCTCAAACAAGCCACCATAGTTGCAGGGGACGTTGGTACTGCTGCTTCTTACGGACCTCCATACATACCAACTGCATGTAACGGGAACCGGAGGGATCAGTTCCCTCCTGGGAATCTGTTCGTGGCGGTGAGTGAAGGGTTGTGGGATAACGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGTGTGAGTGGGAAGAATAGGCCATGTAAGGAAGCTAGTGTTGATGTCAAAGTGGTTGATTTCTGTGCAAACTCCCCATGTCCCAACACCCTCCTCATGTCCAAAGACGCCTTTTCTGCCATCTCTCGCTTCCATAAGTCCCATATCAATATTGAATATACCCACTttcatttaaatgaaaataCTGGTTTGAATTCAAGAAGAAAGTTAAAGAATTCAAAGACGGAAATGGAAGCCACAGCTTCAGCAATCAAATCCCATTTGCTTAAGGGAAATCCAAACCAAATGAAGCCGTCATCAGATGTACCTGAAAGGCAAGATTGGATTTTGATCATGAAAATTGAAGGCATCATGAGTGGATGGATGTTTATCCAGTCCACTCAAGATGATCAAGCCTAA 630 0.4429 MRHLLLALALFLSSLVLKQATIVAGDVGTAASYGPPYIPTACNGNRRDQFPPGNLFVAVSEGLWDNGAACGRRYRIRCVSGKNRPCKEASVDVKVVDFCANSPCPNTLLMSKDAFSAISRFHKSHINIEYTHFHLNENTGLNSRRKLKNSKTEMEATASAIKSHLLKGNPNQMKPSSDVPERQDWILIMKIEGIMSGWMFIQSTQDDQA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0844 209 Gene3D - 25 133 IPR036908 -
Sto5g0844 209 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 7 132 - -
Sto5g0844 209 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 140 IPR007112 -
Sto5g0844 209 SMART dpbb_1 57 130 IPR007112 -
Sto5g0844 209 SUPERFAMILY Barwin-like endoglucanases 24 132 IPR036908 -
Sto5g0844 209 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 132 - -
Sto5g0844 209 Pfam Lytic transglycolase 58 130 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0844 Sto-Chr5 5669278 5670383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0844 2 120 Expansin Gene Family AT2G45110 30.597 7.63e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0844 - - gmx:100792215 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0844 5 5669278 5670383 Sto5g0844 5 5669278 5670383 ECH