Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0840 ATGCAAGAGACGGGTCACGCAGCAACAAGTTCCATTGCTGCGAGTTCTCTGCCTTCAAGCAGTGAAAAATCTTCAAGCTCTGCTCTCCATCTTGAAGTGAAAGAAGGTCCGGAGAGTGATGAGGAGATCAGAAGGGTGCCGGAGATGGGCGGCGAATCCGCCGGAACATCAGCCTCCCGGCCGGACGCCGGCGGAGAACGGGTTCAGGGGACAGGGGAGAGTCAGAGGAAGAGAGGGAGAAACCCAGCTGACAAAGAAAGCAAACGACTCAAAAGGTTGCTGAGGAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGAAAAAAGGCATACTTGATTGATTTGGAAGCAAAGGTTAAAGACTTGGAGAACAAGAATTCGGAGCTGGAAGAGAGGCTTTCCACTTTGCAGAATGAGAATCAGATGCTAAGACATATATTGAAGAACACAACGGCAAGCAGAAGAGGAGGCAGTGGTGGTGTCAATGAAGGAACTTAA 495 0.501 MQETGHAATSSIAASSLPSSSEKSSSSALHLEVKEGPESDEEIRRVPEMGGESAGTSASRPDAGGERVQGTGESQRKRGRNPADKESKRLKRLLRNRVSAQQARERKKAYLIDLEAKVKDLENKNSELEERLSTLQNENQMLRHILKNTTASRRGGSGGVNEGT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0840 164 SUPERFAMILY Leucine zipper domain 88 146 IPR046347 GO:0003700|GO:0006355
Sto5g0840 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Sto5g0840 164 CDD bZIP_HY5-like 89 140 - -
Sto5g0840 164 MobiDBLite consensus disorder prediction 33 48 - -
Sto5g0840 164 PRINTS cAMP response element binding (CREB) protein signature 83 99 - -
Sto5g0840 164 PRINTS cAMP response element binding (CREB) protein signature 101 121 - -
Sto5g0840 164 PRINTS cAMP response element binding (CREB) protein signature 121 138 - -
Sto5g0840 164 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Sto5g0840 164 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 9 154 - -
Sto5g0840 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Sto5g0840 164 MobiDBLite consensus disorder prediction 71 105 - -
Sto5g0840 164 Pfam bZIP transcription factor 85 145 IPR004827 GO:0003700|GO:0006355
Sto5g0840 164 Coils Coil 83 145 - -
Sto5g0840 164 MobiDBLite consensus disorder prediction 1 105 - -
Sto5g0840 164 Gene3D Single helix bin 107 148 - -
Sto5g0840 164 MobiDBLite consensus disorder prediction 1 27 - -
Sto5g0840 164 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 9 154 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0840 Sto-Chr5 5654060 5655007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0840 28 145 bZIP Transcription Factor Family AT5G11260 76.423 1.08e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g0840 bZIP_1 8.4e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0840 K16241 - zju:107405867 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0840 5 5654060 5655007 Sto5g0840 5 5654060 5655007 ECH