Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0833 ATGGATTCTCCTGATGCTGTCAAGAAAACTTCCATTTCTATCGTCACTGCCGATGCTGCTGCTTCTTCAGAATCTCCTCCAGTTCAAGAGTCCCCTTTCTTCAGCTACGTAAACAATTTATCTCCAATAAAGTCTGTCAAGGCTTCTCGTGTGGTTCAAGATTTCCTTGGACTCAATTCCCCACCCAGTGTTTTTACGTCACCACGTATTAATCCCCATCGTGGATCACAGTTCTTGGAAAGGCCTCAATGCTTGCAATCAGCCTCTGTAGAAATTTCTCCGAGTGAAAATCAAGGCAGGAGACTTCTTGATGATCATgatgattccaaatccaataAATCAAGTTCCTTACAGCTGAGGAAGTTTGTAACTGACAATCAGAAGGATCTTGATATCAATAATGATGCAAATACCCAACATTGTAGTTCTTCACCGTGTGTAGAATCTGTAGATGAATATTTGGCTGATCCTGCGGAAATTGATTGTATGTACCCAGGGCATTCAGTCAAACCGGATGCTAAACAATCTAATGACACCGGTGAATCATCACCACATGGCTTAACTCACTCAAAGGAAACCATTTCAAATTTTGATGACAAGAATGGTCCTGGTGACAAGGTGGAAGAACCTTTGATTTTGTTAGAGGAGTCTAAAAACAATTATCAAGAAATGCTGACATTTGTTGATGAACCCGGAAAAGTAGGAGAGAAAATAGATGTTCAATGTGCAAAGTTAGACTCCACTATGTCTGCTGACCTTGCTTTTGAGAAACAGCGTTGTGATGATTCACTTGCCCAGTGTGCAGTACATAAAATGCAGGATTGTCATGATTCTACTTCTCAATTGATGCTTGAGCCTTTGCAGGATGTTGAAGCATGCGAAGCTCGTAGCGAGAAGGGGCCAACCTCTTATGCAGAACAGATCATGTTGCAAGATGCTTCTAAGGTTAGTCAAAAGCACCGTGGCTTGCGTAGACGTTGCCTTCAGTTTGAGGAGGCTGCATCAAATGCTTTTGGTAGTTTAAACAGCTCCCCGCTTCCTACCCATGTGCCAGAAGATTCAATACCATCAGCTACCTCCTCAGATTCAAAAGATTTAAAACCTTCTCATGTGGCATTAAATCCAACTTCAAGCGAAAAGAAAATGGTCAAGCTGTCCAAACCTATTACTTCCTTATTTCCTCCACGATGTAGTGGAAACTTCCCTGTGACAGGTTCCAAGCCATCTGGTATTGGGTTGCATTTAAATAGCATTGTAAATGCTATGCCTCATGGTCGTGCAGCACTTACAGGTATGAGACTAGCAGAGGGTTGTGCGGGTTCAGAAGGCGTGAAGTCATTGACTTCACTAAGCTGCCCTACTGTGCCATCAAACATGGATAGGCAATCATCAGTTGACAATGAAGACCAGAGGCACGAAAGTAATGCTTCAACAGCTGCAGGTTCTTTCTCCTCTGAGTGTCCCAGCTCTATAGAACTGCCGAATTTGTTGATTCACACTGAGCATCCTGTAAGCGTTCAGGACGAGAGAAAATTAAGCTCCGTAGGTGATGGAAATTTTGAGGAGTCCAGCGAAACAagccccaaaaagaaaaagtcagCTCTTCTGTACTTCCTCTTCTCTATGGATATTTATTCTTTATACGTTTACAACTTTACATCACCAAATCCTACATTGTTCTTCAGGAAGAGAATATCAAACACCACTGATGACGATAGTTGTAAAAGGTGCAACTGTAAGAAGAGTAAATGTCTAAAATTATATTGTGATTGTTTTGCTGCCGGATTATATTGTGCTGAGTCCTGTGCTTGCCAAGGCTGCTTTAATAAACCAGAATATGAAAAATGTGTTGTTGAGACAAGACAACAAATTGAATCCCGAAACCCACTTGCATTTGCCCCCAAGATTGTACAGTGTGCTACTGATGTTCCATCAAATAATATGGAGGATGCCAATTTAACGACACCGTCATCAGCAAGGCATAAAAGAGGTTGCAATTGCAAAAAGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTAGGATGCTCTAGTGGATGTCGATGTGAGGGATGCAAGAATGTCTATGGCAGGAAAGAAGATTACGTTTCCATTGAACGTGCATTGAGCGAAGAaagaatgagaaagagaatTGACGAAGGATCAAATATCACGCTTCACAATAAGCCGGAAATGATAGCAAAGAAGAGAGATTTGTTCCATGGAGAGTTGTATGATCTGCATCACCTCTCTCCTCTAACACCATCTCTGCAATGTTCAGACCACGGAAAGCAAGCCGCATATTTCCAAGCTCATTCTGGAAAATATCCTTCAGCCCCTGAATCCGATGTCAATGTGCTTCCACCTCATATTGAATCTTCAAAGAACTCTGAGAGCAGTCTTGTGCTTCTGGAGACAAGTGAGATgtcaagaaatgcctcatatgaTTGCAACAACGTGGAAATAATGAATCCTTCTTCACCGAGATGTAATTCAGTTGTTCCATCAAAGTCTAGTGCTCCATTCTCATCTAAAACAAGGGACCAAACACATATCCCACATTCCATACTGCCCCAGGGAAGTAGTCGCTCCGTATCTGGCGGTTCCCTTCGTTGGCGTAGTTCACCAATCACCCCAATGACTAAATTAGGTGAAACTAAATCTCAACAGCGTCTTGAATCGGATAGCAAATTTCATGACATTCCTGATATGCTGAAGGAAGCTTCAACTCCCGTTAAGTCTGTGAAAGCAAGTTCCCCAAAACAGAAGCGAGTGTCTCCTCCTCACGGTCATCTACGTGAACTTGGTTCAAGCTCTTCAGGAGGCTTGAGAAGTGGCAGGAAATTCATATTGAAAGCTGTTCCTTCTTTCCCACCATTAACCCCTTGCATTGATTCCAAACGAAATGATCATGAGGATTCAGGCACTAGTACATGCAAGTAA 2952 0.4116 MDSPDAVKKTSISIVTADAAASSESPPVQESPFFSYVNNLSPIKSVKASRVVQDFLGLNSPPSVFTSPRINPHRGSQFLERPQCLQSASVEISPSENQGRRLLDDHDDSKSNKSSSLQLRKFVTDNQKDLDINNDANTQHCSSSPCVESVDEYLADPAEIDCMYPGHSVKPDAKQSNDTGESSPHGLTHSKETISNFDDKNGPGDKVEEPLILLEESKNNYQEMLTFVDEPGKVGEKIDVQCAKLDSTMSADLAFEKQRCDDSLAQCAVHKMQDCHDSTSQLMLEPLQDVEACEARSEKGPTSYAEQIMLQDASKVSQKHRGLRRRCLQFEEAASNAFGSLNSSPLPTHVPEDSIPSATSSDSKDLKPSHVALNPTSSEKKMVKLSKPITSLFPPRCSGNFPVTGSKPSGIGLHLNSIVNAMPHGRAALTGMRLAEGCAGSEGVKSLTSLSCPTVPSNMDRQSSVDNEDQRHESNASTAAGSFSSECPSSIELPNLLIHTEHPVSVQDERKLSSVGDGNFEESSETSPKKKKSALLYFLFSMDIYSLYVYNFTSPNPTLFFRKRISNTTDDDSCKRCNCKKSKCLKLYCDCFAAGLYCAESCACQGCFNKPEYEKCVVETRQQIESRNPLAFAPKIVQCATDVPSNNMEDANLTTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVYGRKEDYVSIERALSEERMRKRIDEGSNITLHNKPEMIAKKRDLFHGELYDLHHLSPLTPSLQCSDHGKQAAYFQAHSGKYPSAPESDVNVLPPHIESSKNSESSLVLLETSEMSRNASYDCNNVEIMNPSSPRCNSVVPSKSSAPFSSKTRDQTHIPHSILPQGSSRSVSGGSLRWRSSPITPMTKLGETKSQQRLESDSKFHDIPDMLKEASTPVKSVKASSPKQKRVSPPHGHLRELGSSSSGGLRSGRKFILKAVPSFPPLTPCIDSKRNDHEDSGTSTCK 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0833 983 MobiDBLite consensus disorder prediction 80 96 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 911 983 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 829 890 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 968 983 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 172 191 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 62 119 - -
Sto5g0833 983 SMART CXC_2 660 701 IPR033467 -
Sto5g0833 983 SMART CXC_2 572 613 IPR033467 -
Sto5g0833 983 MobiDBLite consensus disorder prediction 829 898 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 449 487 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 339 373 - -
Sto5g0833 983 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 975 IPR044522 GO:0003700
Sto5g0833 983 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 975 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 449 463 - -
Sto5g0833 983 MobiDBLite consensus disorder prediction 98 114 - -
Sto5g0833 983 ProSiteProfiles CRC domain profile. 573 700 IPR005172 -
Sto5g0833 983 MobiDBLite consensus disorder prediction 166 205 - -
Sto5g0833 983 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 663 697 IPR005172 -
Sto5g0833 983 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 575 610 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0833 Sto-Chr5 5612578 5617362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0833 546 703 CPP Transcription Factor Family AT3G22760 62.658 7.61e-58 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sto5g0833 TCR 4.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0833 K21776 - gmx:547664 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0833 5 5612578 5617362 Sto5g0833 5 5612578 5617362 ECH