Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0823 atgtttTCCAATTCGTTTTTCTGTGGCCAGTCAGAGGAGAAGGAGATGGAGATAGAACAGATGTCCAGGGATGAAGGCAGCCATTTCAGCCTCGTCGGTGCTCCTCTCCCTTCTCTTGGTGCCACCGCCGTCCGCAGCAGTCGCCGACATAAGCTCCGAACATTCATTATCTCCCCCTATAGCCCTCGTTACAGATCGTGGGAGACGTTTCTGGTATTTTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAATTTGGGTTCCTTGAGGAACCCAAGGGTTCTCTTGCTATTGCTGACAATGTTGTCAACGCATTTTTTGCTGTTGACATTGTTCTGACCTTCTTTGTTGCCTACCTTGACAAAAATTCTTATCTCCTCACTGACGACCCCAAAAAGATTGCTAAGAGATATGCCAAAACCTGGTTGGCCCTTGACGTCATCTCTACTATCCCTTGGGAACTTGCTCATAAAGTGTTGCCCCAGCCTCTTCAGACGTATGGATACTTCAATATGCTTCGTCTTTGGCGTCTCCGCAGAGTCAGTGCCATGTTTGCAAGATTAGAAAAGGACAGGAATTTTAGCTACTTCTGGGTGCGCTGTTCAAAGCTCATATGTGTTACTCTATTTGCAGTGCATATTGCTGCCTGCTTTTACTATTTTCTTGCTACAAATCGTGATTCAAAGAGTTCATGGCTTGGGCTAATTACTAATGGTGACACAATGAACCTGTCGGCCCGTTATGTAACAGCAATATACTGGTCCATCGTTACTCTGTCAACAGTTGGTTATGGAGATTTGCATCCTGTAAATTCCAAGGAGATGATCTTTGATATTTTCTATATGCTCTTTAATCTTGGACTTACCGCATATCTGATAGGAAATATGACCAATCTGGTTGTCCATCAGACAAGTCGAACCAGGAAATATAGAGACACTGTGAAAGCTACTGCAGGTTTTGCACAACGGAATCATTTGCCTGCATACTTGCGAGAACAAATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTTCAGCAGCAAGAGATTATTGATTCTCTTCCAAGAGCCATTCAATCTAGCATCTCTAGCTTCCTCTTCTATGAACTTGTTGAGAAAGTCTACTTATTTCATGGTGTATCCAATGACCTACTTTTTCAACTGGTTGCGGAAATGAAAGCCGAGTATTTTCCTCCAAGGGAACAAGTGATTCTACAGAATGAAGCACCAACAGACTTTTATATAATAGTTACTGGTTCAGTTGTTGTTGGTGAGGCAAGGAACGGAGCTGTCGTTGGGGAGATAGGTGTGCTATGTTACAGGCCACAGCTCTTTACAGTTCGAACCAAAAGATTGAGCCAGCTTCTTCGTCTGAACCGCACTACATTTCTAAATCTTGCTCACTCAAATGTTGGGGATGGGACAATAATCATGAACAATTTTCTTCAGCATTTGAAAGACTCGAGGGATCCAGTGATGGATGAAGTTTTAGCAGAAACAGAGGCGATGCTGGCTCGGGGAAGAATGGAATTGCCAATCAGCCCATGCTTTGCTGCAAACAGAGATGACGATCTGTTGTTGCATCATTTGCTGAAGAGAGGTTCAGATCCAAACGAATCAGACAAGAATGGAAGGACAGCACTGCATATTGCGGCATGTAAAGGCAGTGAACATTGTGTTCTTCTGCTTCTAGAATTTGGAGCTGATCCCAACAGCAAAGATTTAGATGGAAGTATCCCACTATGGGAAGCAATGATGGGGGGGCATGAATCCGTGATAAAACTTCTCATAGACAATGGTGCAGACATATCTTATGCTGATGTAGGCCATCTTGCATGCACTGCTGCTGAGCAAAACAACCTGGAATTGCTCAAAGCAATTGCGAAATATGGTGGGAATGTGACGCAGCCCAAAAGCAATGAAACCACAGCACTTCACACAGCCGTATGTGAAGGAAACATTGAAATAGTAAAGTTTCTTCTACAACAAGGAGCAGATGTTGACAGGCCAGATGTTCATGGATGGACTCCTGCGGCTTTGGCAGATCATCAAGGACACGAGGAAATCAAAGAGTTATTCCAGAGGTGTCGAGAGGGCAAAATGCCATCATCAGTTATCCCAAGGCCAATGAATCATGTGGCAATAAAGCTTGGGAGGTTTCAAAGTGAACCAGCAATGCCTGCCCTTTCCCAAGGAAGCATGCCACCACCTGGTCAAGACGTGACTTGGTTGGAGAGTCAACGAGGGCGAAGGACAAACAATTTTCACAATTCTTTGTTTGGGGTCATGTCCGCTGCTGCTAATCGTGATCAAGCCGATTCATCACAAGAAAATCTTGGTGTTCTGGAGGACCCGAATGGATTACCAGCCAGAGTAATTCTGACTTGTCCAGAAAAAGGGGAACATGCTGGAAAGCTTGCTTTGCTGCCAAAGACCCTTCAAGAACTGATAGACATGGGTGCCAAAAAGTTCGATTTTCCTGCCACGAAAATTTTGACTGCAGATGGAGCTGAAATTGATGACATTAAGCTTATACGAGATGGTGATCGCCTCATTCTTGCACGTGATAATGCTCATGACTACGCCCAGTGA 2604 0.4416 MFSNSFFCGQSEEKEMEIEQMSRDEGSHFSLVGAPLPSLGATAVRSSRRHKLRTFIISPYSPRYRSWETFLVFLVFYTAWVCPFEFGFLEEPKGSLAIADNVVNAFFAVDIVLTFFVAYLDKNSYLLTDDPKKIAKRYAKTWLALDVISTIPWELAHKVLPQPLQTYGYFNMLRLWRLRRVSAMFARLEKDRNFSYFWVRCSKLICVTLFAVHIAACFYYFLATNRDSKSSWLGLITNGDTMNLSARYVTAIYWSIVTLSTVGYGDLHPVNSKEMIFDIFYMLFNLGLTAYLIGNMTNLVVHQTSRTRKYRDTVKATAGFAQRNHLPAYLREQMLAHLFMKYRTDLEGLQQQEIIDSLPRAIQSSISSFLFYELVEKVYLFHGVSNDLLFQLVAEMKAEYFPPREQVILQNEAPTDFYIIVTGSVVVGEARNGAVVGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNLAHSNVGDGTIIMNNFLQHLKDSRDPVMDEVLAETEAMLARGRMELPISPCFAANRDDDLLLHHLLKRGSDPNESDKNGRTALHIAACKGSEHCVLLLLEFGADPNSKDLDGSIPLWEAMMGGHESVIKLLIDNGADISYADVGHLACTAAEQNNLELLKAIAKYGGNVTQPKSNETTALHTAVCEGNIEIVKFLLQQGADVDRPDVHGWTPAALADHQGHEEIKELFQRCREGKMPSSVIPRPMNHVAIKLGRFQSEPAMPALSQGSMPPPGQDVTWLESQRGRRTNNFHNSLFGVMSAAANRDQADSSQENLGVLEDPNGLPARVILTCPEKGEHAGKLALLPKTLQELIDMGAKKFDFPATKILTADGAEIDDIKLIRDGDRLILARDNAHDYAQ 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0823 867 Gene3D - 65 302 - -
Sto5g0823 867 Pfam Ion transport protein 65 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto5g0823 867 Pfam Cyclic nucleotide-binding domain 400 473 IPR000595 -
Sto5g0823 867 Gene3D - 517 699 IPR036770 -
Sto5g0823 867 SUPERFAMILY Ankyrin repeat 521 698 IPR036770 -
Sto5g0823 867 CDD CAP_ED 380 474 IPR000595 -
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0823 867 SMART cnmp_10 380 486 IPR000595 -
Sto5g0823 867 ProSiteProfiles Ankyrin repeat region circular profile. 580 611 - -
Sto5g0823 867 ProSiteProfiles KHA domain profile. 795 867 IPR021789 -
Sto5g0823 867 SUPERFAMILY Voltage-gated potassium channels 59 301 - -
Sto5g0823 867 ProSiteProfiles cAMP/cGMP binding motif profile. 380 488 IPR000595 -
Sto5g0823 867 ProSiteProfiles Ankyrin repeat profile. 580 612 IPR002110 GO:0005515
Sto5g0823 867 ProSiteProfiles Ankyrin repeat profile. 644 676 IPR002110 GO:0005515
Sto5g0823 867 Gene3D Jelly Rolls 345 494 IPR014710 -
Sto5g0823 867 ProSiteProfiles Ankyrin repeat region circular profile. 547 578 - -
Sto5g0823 867 PANTHER POTASSIUM CHANNEL AKT1 3 862 IPR045319 GO:0005249|GO:0006813
Sto5g0823 867 PANTHER POTASSIUM CHANNEL AKT1 12 859 IPR045319 GO:0005249|GO:0006813
Sto5g0823 867 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
Sto5g0823 867 Pfam Ankyrin repeats (3 copies) 619 696 IPR002110 GO:0005515
Sto5g0823 867 Pfam Ankyrin repeats (3 copies) 522 608 IPR002110 GO:0005515
Sto5g0823 867 PRINTS Ankyrin repeat signature 548 563 IPR002110 GO:0005515
Sto5g0823 867 PRINTS Ankyrin repeat signature 596 610 IPR002110 GO:0005515
Sto5g0823 867 ProSiteProfiles Rhodanese domain profile. 545 595 IPR001763 -
Sto5g0823 867 Pfam KHA, dimerisation domain of potassium ion channel 795 857 IPR021789 -
Sto5g0823 867 PANTHER POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 3 862 - -
Sto5g0823 867 ProSiteProfiles Ankyrin repeat region circular profile. 644 675 - -
Sto5g0823 867 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 12 859 - -
Sto5g0823 867 SUPERFAMILY cAMP-binding domain-like 305 489 IPR018490 -
Sto5g0823 867 SMART ANK_2a 580 609 IPR002110 GO:0005515
Sto5g0823 867 SMART ANK_2a 611 640 IPR002110 GO:0005515
Sto5g0823 867 SMART ANK_2a 644 673 IPR002110 GO:0005515
Sto5g0823 867 SMART ANK_2a 547 576 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0823 Sto-Chr5 5562926 5569219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0823 12 859 Ion Channels AT4G32500 60.669 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0823 K21867 - gmx:100786870 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0823 5 5562926 5569219 Sto5g0823 5 5562926 5569219 ECH