Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0822 ATGGGTTCACCCTTCAAGGGCATTGTTCAAGATGTCAAAGGAAGAGCTGCATGCTATAAACAGGATTGGATTTGCGCAATATGTTCCGGCGCAAAGATATTGGCTCCAactttctacatattctttgcTTCTGCTCTCCCTGTCATTGCCTTTGGTGAGCAACTTAGTACGCATACAGGGGGAAGTTTGAGCACAGTGGAAACATTAGCATCCACTGCTTTATGCGGAATTATCCACTCCATATTTGGTGGACAGCCTTTGTTGATTTTAGGAGTTGCCGAGCCCACTGTTATAATGTATGGTTATCTGTATGATTTCAGCAAAGAAAGGCCAGAGCTGGGTACCAAGCTATTTCTGGCTTGGGCTGGCTGGGTCTGTGTCTGGACTGGACTCATGTTAATTATGCTGGCAATTTTTAATGCTTGCACAATTATTACTAGGTTTACTAGAATCGCAGGGGAATTATTTGGCATGTTAATCACTGTCCTATTCTTTCAAGAGGCTATAAGgGGAATAATAGGTGAGTTTGGTATACCCAAGGCTGCAGATCCTTCAGCAGAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTACTTGCAACCATTTTCTGTTTTGGGTTGATTCTCACAGCCACAATAAGCAGAAAAGCCAGATCATGGCGATATGGAACTGGGTGGCTACGAGCTTTCATTGCAGATTATGGGGTTCCACTGATGGTCGTGTTATGGACCCTGTTATCCTATGTTGTACCAAGCAAAGTTCCAGATGCTGTTCCTAGGAGGCTGTATTGTCCTCTCCCTTGGGAATCTGCGTCTCTGTACCACTGGACAGTAGTGAAGGACATGGGGAAGGTACCATTGGTTTATATCTTGGCGGCATTGATTCCGGCTGTGATGATAGCAGGATTATACTTCTTTGATCACAGTGTAGCATCCCAGATGGCTCAACAAAAGGAGTTTAACCTTCAAAAACCATCTGCCTACCACTATGACATGTTATTGCTTGGAATTATGACTGTGATTTGTGGTCTTCTGGGGCTTCCTCCATCAAATGGAGTCCTTCCACAGTCGCCAATGCATACAAAGAGTCTGGCATTGATGCGAAAGAAGGTGGTACAAAGTGCCAAAGAATGCATTCAGCAACAAAGGACCAACTCTGAATTGTACGGAAAGATGCAAGCAGTGTTCATAGAATTGGACACGGCCCCTACAGATAAGGAGTTGGAGAATCTGAGGCGGGCTGTAATGAAATGTAAGGACAATGACGGTGAAAAGGGCAAACTTGATCCTGAGGTACTCATAGATGACTATCTACCTGTCCGGGTTAACGAGCAAAGAATGAGCAACTTTTTGCAGTCTGTGCTTGTGGGCGCATTAATTTTTGGCATCCCCATTATCAAAAGGATCCCCACCTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGGAATCAGTTCTGGGAGAGGATATTGCTTCTCTTCATCACTCCAAGCCGCCGTTACAAAATTTTGGAAGGTTCTCATGTTTCATTCGTGGAGTTAGTACCATTCAAGACCATAGCTGCATTCACACTCCTCCAGGTTGCATATTTGCTGGTGTGTTGGGGCGTGACATGGGTACCTATAGGTGGAATATTGTTTCCACTACCCTTCTTTCTTCTCATATCCATTAGAGAGCATTTGCTACCAAAGCTTTTCGACGCTAACCATCTTCAGGAGCTAGATGCTTCTGAGTACGAGGAAATTGCTGGCGATCCTCTTGCTTCTCGTAATAAATCATTTGTGGATAAGGATTCATCTGATGGTGATAGTGATGATAGTCCTGAGGATTTCTATGATGCTGAGATTTTGGATGAGATGACAACCAACAGGGGAGAGGTGAAACTCAGAGCTAATGAGAAGAGTGTTAAATATGGCTTTGTTTTAAACAGCTCCGAATTTGCCGGTAGAATTGTTTTGATGCAAGAGAGTGATGCTGTGGAGTAA 2004 0.4341 MGSPFKGIVQDVKGRAACYKQDWICAICSGAKILAPTFYIFFASALPVIAFGEQLSTHTGGSLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYGYLYDFSKERPELGTKLFLAWAGWVCVWTGLMLIMLAIFNACTIITRFTRIAGELFGMLITVLFFQEAIRGIIGEFGIPKAADPSAEEFQFQWLYTNGLLATIFCFGLILTATISRKARSWRYGTGWLRAFIADYGVPLMVVLWTLLSYVVPSKVPDAVPRRLYCPLPWESASLYHWTVVKDMGKVPLVYILAALIPAVMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDMLLLGIMTVICGLLGLPPSNGVLPQSPMHTKSLALMRKKVVQSAKECIQQQRTNSELYGKMQAVFIELDTAPTDKELENLRRAVMKCKDNDGEKGKLDPEVLIDDYLPVRVNEQRMSNFLQSVLVGALIFGIPIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILEGSHVSFVELVPFKTIAAFTLLQVAYLLVCWGVTWVPIGGILFPLPFFLLISIREHLLPKLFDANHLQELDASEYEEIAGDPLASRNKSFVDKDSSDGDSDDSPEDFYDAEILDEMTTNRGEVKLRANEKSVKYGFVLNSSEFAGRIVLMQESDAVE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0822 667 Pfam HCO3- transporter family 197 382 IPR011531 GO:0006820|GO:0016021
Sto5g0822 667 Pfam HCO3- transporter family 4 175 IPR011531 GO:0006820|GO:0016021
Sto5g0822 667 Pfam HCO3- transporter family 441 531 IPR011531 GO:0006820|GO:0016021
Sto5g0822 667 PANTHER ANION EXCHANGE PROTEIN 1 638 IPR003020 GO:0005452|GO:0006820|GO:0016020
Sto5g0822 667 MobiDBLite consensus disorder prediction 596 616 - -
Sto5g0822 667 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 638 - -
Sto5g0822 667 Gene3D Helical hairpin bin 15 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0822 Sto-Chr5 5557474 5560678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0822 4 637 Antiporters AT4G32510 67.178 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0822 K24194 - gmx:100792745 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0822 5 5557474 5560678 Sto9g3285 9 32962135 32962413 CCT
Sto5g0822 5 5557474 5560678 Sto5g0822 5 5557474 5560678 ECH
Sto5g0822 5 5557474 5560678 Sto9g3285 9 32962135 32962413 ECH