Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0810 ATGGAGAGAAGTGAAATATCCAGAGTTGATAGTCTACGTGAAATCTCCAGAGTTGAAAGTCTACGTGGTGTCTGGAGAAGCAATAGCATGGAAATGTTCTCAACATCTGCTCGTGAGGATGATGAAGAAGCATTGAAGTGGGCAGCAATAGAGAGACTCCCTACGTATCTACGCATGAGGAGAAGCATACTCACTAGTGAAGAAGGTGATGCGAAAGAAATAGACATCAAGCAACTAGGATTTACAGAGAGAAAGATTCTGCTAGAGAGACTGTTGAAATTAGCTGAAGAAGATAATGAGAAATTCTTGTTGAAACTCAAGCAACGCATGGAACGAGTTGGACTTGATATTCCTACAATTGAAGTTCGATTTGAGCATGTAAATGTGGAGGCAGAAGTGTACGTTGGAAGCAGAGCATTACCTACATTACTCAACTTTTTTGTGAATGTATTAGAGGGATTCTTAAATTATCTTCACATCATTCCAAGTCCAAAGAAACCCTTACATATTCTTCAGAATGTCAGTGGAATCATAAAGCCTCAAAGAATGACATTGCTTTTAGGGCCCCCAGGCTCTGGAAAGACTACTTTGCTATTGGCCTTGGCTGGGAAACTCAGTAAAGACTTAAAATATTCTGGGAGAGTCACATATAATGGACAAGGGCTAGAAGAGTTTGTACCACAGAGGACATCAGCTTATATTAGTCAACATGATATCCACATTGGAGAAATGACTGTGAGAGAAACACTAGCTTTCTCAGCTAGATGTCAAGGAGTCGGGCAGAATTATGAGATGCTGACAGAGCTactgagaagagagaaagaagcaAAGATAAAACCAGATCCTGATATTGATGCTTATATGAAGGCTGCAGCATTAGAAGGGCAGGAGGCAAGTGTAGTCACTGATTACATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGTGGACAGAAAAAGAGAGTTACGACAGGGGAGATGCTGGTAGGACCAGTAAGAGTGTTGTTCATGGATGAGATTTCAACTGGTTTGGACAGTTCAACAACCTTTCAAATAATCAATTCAATCCGGGAATCCATCCATATTCTCAAGGGAACTGCACTTGTCTCTCTACTACAGCCAGCACCAGAAACATATGAACTATTTGATGATATAATACTTCTCACAGATGGCCAAATTGTTTACCATGGTCCAAGAGAGAATGTACTCGAGTTCTTTGAATCTTTGGGTTTTAAGTGTCCTGAAAGAAAAGGAGTAGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAGTACTGGGCACATAAAGATAAACCATACAGCTTTGTTTCTGTAAAGGATTTTGCTGAAGCCTTTCAGTCATTTCACGTTGGTCACAAACTTGGAGAGGAACTAGCCAATCCTTTTGACAAGACCAAATGCCACCCAGCTGCCTTGACCACTAAGAAATATGGTGTTAGCAAGAAGGAGCTCCTGAAGGCTTGTGTTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGCAACCCAACTTTGTTATTTAGCTACCATCACAACAACATTATTTCTACGAACTAAGATGCATCGGGATACTATCATAGACGGAGGAACTTATATGGGTGCTCTGTTCTTCGCAATTATTGTAGCTATGTTCAATGGAATATCAGAGCTAAATATGGCAATCATGAAACTTCCTGTCTTCTTCAAGCAAAGAGACCTTCAGTTCTATCCTGCATGGGCCTATTCTCTACCACCATGGATCCTCAAAATACCAATCACCCTTGTAGAAGTTGCCATTTGGGAAGGAATAAGTTATTATGCCATTGGCTTCGATCCTGACATTACAAGGCTTTTCAAGCAGTACTTGCTACTCCTGTGCATTAACCAGATGGCATCAGCACTATTTCGATTGATGGCAGCATTAGGAAGGGATATAGTAGTTGCAAACACTGTTGGAGCATTTGCTTTACTcgtggttttggttttgggaggATTTGTAATTTCACGAGAGGATGTACACAAATGGTTTCTGTGGGGTTACTGGTCCTCGCCATTGATGTACGGCCAGAATGCCATATCTGTGAATGAATTTCTCGGGCATAGTTGGAGAaagGTTACTGCTAATAGCAGCGAAACATTGGGAGTCATGGTACTAAAATCTCGTGGGTTTTTCCCGGAAGCTTACTGGTATTGGATTGGAGTAGGAGCTTTGATTGGTTATACCTTCCTATTTAATTTCCTCAATACCTTGGCTTTGCAATATCTTAATCCATTCAGAAAGGCTCAGGCAGGGTTATCTCAAGAGAATTTGCTAGAGAGAAATGCTTCTAAAAATATAGAGTTGATTGAACAATCATCAATTGGAAAGAGCTCTTCTGGATTATATTCAGACACAAATATTGAAACATCGAGGTCATTTTCTGGTAGAGTGAGTGATGAAAAAGCTAGTAGAAGCGGAAGCAGGGGTATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGACGAGATCAGATATTCTGTAGACATGCCCCAGgaaatgaaaaatCAAGGAGTTTTCGAGACTCGTCTTGAGCTTTTGAAGGGTGTTAGCGGAGCTTTTAGACCTGGAGTACTAACAGCTTTGATGGGTGTGAGCGGTGCTGGAAAGACTACTCTAATGGATGTGTTAGCTGGAAGAAAAACTGGAGGATATATTGAAGGAAACATCACAATATCTGGGTATCCAAAGAGACAAGAAACATTTGCTCGCATATCAGGATATTGTGAACAATTCGATATCCACTCACCCTATGTTACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGACTATCCCCTGAAGTTGATTCTTCAAATAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTACCTCATTGAGAGAAGCATTAGTTGGATTGCCAGGTGAGACTGGACTTTCAACTGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCTTCAATAATATTCATGGATGAACCAACCTCTGGTCTTGATGCCAGAGCAGCTGCAATTGTAATGAGAACCGTGAGGAACACGGTAGACACAGGTCGTACTGTAGTTTGCACCATCCACCAGCCAAGCATTGATATATTTGATGCCTTTGATGAGCTGCTACTTCTGAAACTAGGAGGAGAGCAGATATATGCTGGTCCATTAGGGCGCCATTGTTCCCATCTGATTCAGTACTTCGAGGCTATTCAAGAAATTCCCAAGATCAAAGAAGGTTATAATCCAGCAACCTGGATGTTGGAGGTTACATCAGCAGGAACAGAAGCAAACCTTAGGGTCAACTTCACTAATGTGTACAGAAACTCAGAACTCTACAGGAGAAACAAACAATTGATCCAGGAGCTTAGTAGGCCTCCTCAAGATTCTAAAGATCTATACTTTGCTAGTCAGTATTCACAAACTTTTCTCCAACAATGTGTAGCTTGCCTATGGAAACAGCATTTATCATATTGGCGGAACACGTCATATACAGCAGTGAGACTTCTATTCACAACACTCATAGCCTTTTTGTTTGGAATGATTTTTTGGGGCATTGGCTTGAAAAGgagaaaggAGCAAGACCTATTCAATGCAATGGGTTCAATGTATGCTGCTGTTACCTTCATTGGGGTACAAAATGCAGCCTCAGTGCAGCCCATAATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTATTCCGCTTTACCATATGCTCTAGCACAGGTTATTATCGAGCTTCCCCACATCTTCGTTCAGACTGTGATATATGGGATTATAATATATGCCATGATGGGATTTGAGTGGAAAGCGTCCAAGTTCTTGTGGTACCTCTTCTTCATGTACTTCACCTTTTTATACTTCACATTCTATGGTATGATGTCTATGGCAATTACACCCAACCCCCACATTTCTGGCGTTTTGTCAAGCGCCTTCTATGCAATATGGAACCTTTTCTCAGGCTTCGTCATTCCCGTATCGAGAATACCGATATGGTGGAAGTGGTACTATTGGATGTGCCCCGTTGCATGGACCTTATATGGATTGATTGCATCCCAATACGGAGACGATGCGAAGAAACTAGAGAACGGACAAAGAGTAGAAGAATTTGTGAGGAGTTACTTCGGCTTTAGCCATGACTTTCTGGGAGTAGTTGCGGTTGTCGTGGCGGGTTTTTCAGTGTTCTTCGCGCTCATCTTCGCCTTCGGCATCAAAGTATTGAACTTCCAGAAAAGATGA 4356 0.4075 MERSEISRVDSLREISRVESLRGVWRSNSMEMFSTSAREDDEEALKWAAIERLPTYLRMRRSILTSEEGDAKEIDIKQLGFTERKILLERLLKLAEEDNEKFLLKLKQRMERVGLDIPTIEVRFEHVNVEAEVYVGSRALPTLLNFFVNVLEGFLNYLHIIPSPKKPLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLSKDLKYSGRVTYNGQGLEEFVPQRTSAYISQHDIHIGEMTVRETLAFSARCQGVGQNYEMLTELLRREKEAKIKPDPDIDAYMKAAALEGQEASVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPVRVLFMDEISTGLDSSTTFQIINSIRESIHILKGTALVSLLQPAPETYELFDDIILLTDGQIVYHGPRENVLEFFESLGFKCPERKGVADFLQEVTSRKDQWQYWAHKDKPYSFVSVKDFAEAFQSFHVGHKLGEELANPFDKTKCHPAALTTKKYGVSKKELLKACVSREFLLMKRNSFVYIFKATQLCYLATITTTLFLRTKMHRDTIIDGGTYMGALFFAIIVAMFNGISELNMAIMKLPVFFKQRDLQFYPAWAYSLPPWILKIPITLVEVAIWEGISYYAIGFDPDITRLFKQYLLLLCINQMASALFRLMAALGRDIVVANTVGAFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAISVNEFLGHSWRKVTANSSETLGVMVLKSRGFFPEAYWYWIGVGALIGYTFLFNFLNTLALQYLNPFRKAQAGLSQENLLERNASKNIELIEQSSIGKSSSGLYSDTNIETSRSFSGRVSDEKASRSGSRGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVFETRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKRQETFARISGYCEQFDIHSPYVTVYESLLYSAWLRLSPEVDSSNRKMFIEEVMELVELTSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQEIPKIKEGYNPATWMLEVTSAGTEANLRVNFTNVYRNSELYRRNKQLIQELSRPPQDSKDLYFASQYSQTFLQQCVACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGMIFWGIGLKRRKEQDLFNAMGSMYAAVTFIGVQNAASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHIFVQTVIYGIIIYAMMGFEWKASKFLWYLFFMYFTFLYFTFYGMMSMAITPNPHISGVLSSAFYAIWNLFSGFVIPVSRIPIWWKWYYWMCPVAWTLYGLIASQYGDDAKKLENGQRVEEFVRSYFGFSHDFLGVVAVVVAGFSVFFALIFAFGIKVLNFQKR 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0810 1451 Pfam ABC transporter 171 353 IPR003439 GO:0005524
Sto5g0810 1451 Pfam ABC transporter 882 1034 IPR003439 GO:0005524
Sto5g0810 1451 SMART AAA_5 180 405 IPR003593 -
Sto5g0810 1451 SMART AAA_5 891 1083 IPR003593 -
Sto5g0810 1451 Gene3D - 868 1105 IPR027417 -
Sto5g0810 1451 PANTHER ATP-BINDING CASSETTE TRANSPORTER 22 1451 - -
Sto5g0810 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 428 IPR003439 GO:0005524
Sto5g0810 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 854 1106 IPR003439 GO:0005524
Sto5g0810 1451 CDD ABCG_PDR_domain1 153 410 IPR034001 -
Sto5g0810 1451 Gene3D - 158 463 IPR027417 -
Sto5g0810 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 876 1091 IPR027417 -
Sto5g0810 1451 Pfam ABC-transporter N-terminal 78 146 IPR029481 -
Sto5g0810 1451 Pfam Plant PDR ABC transporter associated 724 785 IPR013581 -
Sto5g0810 1451 Pfam ABC-2 type transporter 507 719 IPR013525 GO:0016020|GO:0140359
Sto5g0810 1451 Pfam ABC-2 type transporter 1179 1393 IPR013525 GO:0016020|GO:0140359
Sto5g0810 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 428 IPR027417 -
Sto5g0810 1451 CDD ABCG_PDR_domain2 851 1089 IPR034003 -
Sto5g0810 1451 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 22 1451 - -
Sto5g0810 1451 Pfam ABC-2 type transporter 386 437 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0810 Sto-Chr5 5506911 5513520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0810 879 1066 Calmodulin-binding Proteins AT2G36910 26.108 4.76e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0810 K08711 - gmx:100810505 2436.76