Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0800 ATGGCACAGCATAACAACAATGGCAATCACAGTGCGAGCCAACAGTTAGTAAAACCAATCTTCCATGACTTCATGGGCACCAAGCCCACTGATTCGCATGTCGTTTTGGCCCCTAAATCAGCCGATGGGAGGCTTCCGGAGGCGTCGGCATCAGTCTCCGTTGCCACCTCTTCTGGCGGTGCCCGTGGACCCCTCTCCACCACCTCTGATATCGCTTCCGGAAGTCATCTCGAAGGAGTTCCATTTTATTGTCCAAGGAGTGATATTTCTGGCTCTGAGATAAGTAACAGAATTGTAGGAAACAAGAGAAGTAATTCTGATTCCACTTTTATGAGTTCCTCCAGAGATGCCTTCCCAATGGTTCCtgactctcttcaaaactcacATTTAATGAAGATCCTCCGGAATGCAGCTGGAGGAGAACGGCAAAGAAGGTCCAATGATGATAATGTATTTCTTGGTATGCAGCCCATGAAGCCAACTTCTGCTTCTCATATATATCAGCCTCCCACTGGCACTAAGATTGATGTTAATAAATGGGAGCGATCTATTCTCATGAACGCTGGCCCCTCCATACAACATGCTCCACGTGGGGGTCAACTGGCACCTTTTGTGCATCAGATAGCTTCTAACAAGATCAGGGATACCAATGCTGGTCCTTCATTTATCTCTCAATCAGCTGCTGATGAAGGATCAAGAACTGGAATGAAGGGCCCTGGAATTTTGAGTTCTATTAACACGACCACTACTGCTTCTGAGAAAACACTGTCTGCAGCACCCCTCAGTGGAAGCAGGCCAAAGCCAGTAACTGGTGTAATAGACCCAGAATCATCTATCCCTCCAAGTCGACATGGATTAGCATCCTCCAGCCGTCAGATGACTATATTTTATGGAGGTCAAGCTCATGTGTTTGATGATGTCAATCCTAATAAGGCAGAAGTTATAATGGCTTTAGCTGGATCAAATGGTGGATGTTGGTCCACCACTTACTCTCCCAAATCTGGTTTAAAGCCAATTAATGATAGCAGCTTTCTCTGTGGAGAAAGTGAAACAGGTGCAGTGAATAACATGACACTCCCCCAGGAGCTTCATGGAAGATCATCATCTTTTACAGGAACTTCTAGTCTCACGATTAAGTCCGGTGATCAAGCAGGGGCACATCAGGGAAGCATTAATGTAGCTAAAGAAGATACGAGAAATTCAGTTAAAGCAGCAAATCCTGGTTCTGACGACAAAAGAACGCAATGA 1248 0.4495 MAQHNNNGNHSASQQLVKPIFHDFMGTKPTDSHVVLAPKSADGRLPEASASVSVATSSGGARGPLSTTSDIASGSHLEGVPFYCPRSDISGSEISNRIVGNKRSNSDSTFMSSSRDAFPMVPDSLQNSHLMKILRNAAGGERQRRSNDDNVFLGMQPMKPTSASHIYQPPTGTKIDVNKWERSILMNAGPSIQHAPRGGQLAPFVHQIASNKIRDTNAGPSFISQSAADEGSRTGMKGPGILSSINTTTTASEKTLSAAPLSGSRPKPVTGVIDPESSIPPSRHGLASSSRQMTIFYGGQAHVFDDVNPNKAEVIMALAGSNGGCWSTTYSPKSGLKPINDSSFLCGESETGAVNNMTLPQELHGRSSSFTGTSSLTIKSGDQAGAHQGSINVAKEDTRNSVKAANPGSDDKRTQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0800 415 MobiDBLite consensus disorder prediction 365 415 - -
Sto5g0800 415 MobiDBLite consensus disorder prediction 252 286 - -
Sto5g0800 415 Pfam tify domain 288 320 IPR010399 -
Sto5g0800 415 MobiDBLite consensus disorder prediction 50 72 - -
Sto5g0800 415 MobiDBLite consensus disorder prediction 41 72 - -
Sto5g0800 415 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 414 IPR040390 -
Sto5g0800 415 ProSiteProfiles Tify domain profile. 286 321 IPR010399 -
Sto5g0800 415 PANTHER PROTEIN TIFY 8 58 414 - -
Sto5g0800 415 SMART tify_2 286 321 IPR010399 -
Sto5g0800 415 MobiDBLite consensus disorder prediction 365 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0800 Sto-Chr5 5435421 5439801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0800 18 319 Tify Gene Family AT4G32570 42.089 4.57e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto5g0800 tify 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0800 - - gmx:100807222 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0800 5 5435421 5439801 Sto9g3271 9 32887583 32890690 CCT