Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0796 ATGAATAGAGAGAGTACAATTGGTGCCAAAGATGAGGAGCGTCCAGTGCGAATCACGCGAGCTAGAGCTAGGGCCTTGGGATCACTCGGAGGTATACCTCCCGCCTCAAGACCATCCTTTAAACCAGAGCAAAGGCCTATCCTTGGAGCAAATTCCAAAAGAGCAGCATCTGATGAGAACAAAACTTCTTTGGTTACTGATGCTGGTCTTCTGCATAAGAGGAGGGCAGTGCTTACGGATGTAACTAATgtctcccaaaaatcatgtaatAAGTATATTAATGGATCGAGAATTCAGGCAACAGGAGTTTATATGGAGAAAAACATAAAACTAGAATCAGATGTCTCCATAGAAGTTTCATCAACACAAGAGGATGTCAAAACAAAGTTAGCTGAAGATTTATCGAAAATAAGGATGGTGGAAGCACGAGACACCAGTACTGTCGAAGTAAGGTTTGAACACAAAAAGGCACCACAACGATGTGCATCCAATGGCGTAAGAGAACCTGTTTTAGCACATCCTATGCAATCGCTGCGGGATTCTGTGAATGAACTCCCAAACCCTCTAAATAAAGACAAAGATATGAGTTTTGAGAAAGAAGAAGCGTCAGATGGCAGGGGCATTGTGAACATTGATTCAGAGTTAAAGGATCCTCTAGTTTGGAGTTTATATGCTCCACTTATATACAACAATATACGTGTCGCAGAGCTTGAAAGGAGACCATTGGCTGATTACATGGACAGATTGCAGCAAGAAATCACTCCAAGCATGCGAGGAGTTCTAATTGATTGGCTTATTGAGGTTTCCGATGAATATAAGCTGGTTCCAGACACTCTTTACCGTACAGTAAATCTCATTGATCGTTTTCTCTCTAAGAGATTGATTCAGAAACGAAGGCTTCAGCTGCTTGGGGTTACTTGCATGTTGATTGCTTCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGACTTTTGCTTCATCACGGACCATACATACCCAAGAGAAGAGGTATTGAAAATGGAGACTGAAGTTTTAAACATCTTGCATTTTCAGTTATCTGTTCCCACAACCAAAACATTTCTCAGGAGATACATCCAAGCTTCACAATCTTCCTGCAAGGTTCCTTGTGCTGAACTGGAGTTCCTGGCAAATTACTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCCTGACGTTCCTACCTTCCCTAATAGCTGCATCGGCTGTGTTTCTTGCCAGATGGACTCTCAACCAGTCAGAGCATCCATGGAATCCGACTCTGGAGTACTACACAAACTATAAAGCATCAGATCTTAAAACTACTGTCCTTGCACTGGAAAATTTGCAGCATAATACCAAAAGCTGTTCCCTTTCTGCTattcatgaaaaatataaacaacAGAAGTTCAACTGTGTGGCAACGTTGTCTCCAAAATCGGCGCAATCACTCTTCCAGGAGGTGTTGCAAGTTGCACGTGTATCAGAAAGTTGGGAGTGGTCTAAATTTGACTTCTTACTTGCTGCTGATCTTTGTAATTGTATTGCTGCCACTGCTCCTCCTTTCTCTGTGATGATGGGTGATCGACCTGCGTGGAAACATAACAAGGATGATACCTTTTCTACTAAATCTGTGTATCATGCAATTACTAAGTTCAGAATCAGAGGTGAAAGTAATAACTTTTGGAAGTGGAAGGGGCATGGAGAAAATCCGCTCTTTCCTTTGGCGAAAAGACGTGGAATGGCGGACATGGATACTTGCTCGCAGTCTAATTTGGCTTGA 1782 0.4153 MNRESTIGAKDEERPVRITRARARALGSLGGIPPASRPSFKPEQRPILGANSKRAASDENKTSLVTDAGLLHKRRAVLTDVTNVSQKSCNKYINGSRIQATGVYMEKNIKLESDVSIEVSSTQEDVKTKLAEDLSKIRMVEARDTSTVEVRFEHKKAPQRCASNGVREPVLAHPMQSLRDSVNELPNPLNKDKDMSFEKEEASDGRGIVNIDSELKDPLVWSLYAPLIYNNIRVAELERRPLADYMDRLQQEITPSMRGVLIDWLIEVSDEYKLVPDTLYRTVNLIDRFLSKRLIQKRRLQLLGVTCMLIASKYEEICAPRVEDFCFITDHTYPREEVLKMETEVLNILHFQLSVPTTKTFLRRYIQASQSSCKVPCAELEFLANYLAELTLVEYSFLTFLPSLIAASAVFLARWTLNQSEHPWNPTLEYYTNYKASDLKTTVLALENLQHNTKSCSLSAIHEKYKQQKFNCVATLSPKSAQSLFQEVLQVARVSESWEWSKFDFLLAADLCNCIAATAPPFSVMMGDRPAWKHNKDDTFSTKSVYHAITKFRIRGESNNFWKWKGHGENPLFPLAKRRGMADMDTCSQSNLA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0796 593 Gene3D - 228 475 - -
Sto5g0796 593 SUPERFAMILY Cyclin-like 216 353 IPR036915 -
Sto5g0796 593 SUPERFAMILY Cyclin-like 355 478 IPR036915 -
Sto5g0796 593 PANTHER CYCLINS 52 485 IPR039361 -
Sto5g0796 593 Pfam Cyclin, C-terminal domain 356 478 IPR004367 -
Sto5g0796 593 ProSitePatterns Cyclins signature. 258 289 IPR006671 -
Sto5g0796 593 MobiDBLite consensus disorder prediction 25 45 - -
Sto5g0796 593 Gene3D - 241 354 - -
Sto5g0796 593 CDD CYCLIN 257 346 IPR013763 -
Sto5g0796 593 Pfam Cyclin, N-terminal domain 228 354 IPR006671 -
Sto5g0796 593 SMART Cyclin_C_2 356 479 IPR004367 -
Sto5g0796 593 SMART cyclin_7 360 448 IPR013763 -
Sto5g0796 593 SMART cyclin_7 263 347 IPR013763 -
Sto5g0796 593 CDD CYCLIN 354 446 IPR013763 -
Sto5g0796 593 PANTHER CYCLIN-A2-4 52 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0796 Sto-Chr5 5420859 5426914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0796 3 485 Core Cell Cycle Gene Families AT5G25380 51.653 8.21e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0796 K06627 - gmx:547780 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0796 5 5420859 5426914 Sto5g0796 5 5420859 5426914 ECH