Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0776 ATGTCAATAACGCAAATCAGAGCAGCGTTATCATTGCTAGTTAGAAGAAGCTCTAGTGATGAAACAAGTAACTTGGCCTCATTTTCTAGCAGCCTCTTACCAGCATTTGGCACCAACATAGTTGATGATGCTTACTTAAACCGTCGAAAATATGTCATTGCTCCCTTTGATCGTAGATATCGgttGTGGCAGACTTCCTTGGTGGCATTGGTGGTATACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCAGAAAAGGGGCAACTGGGTGGTTGATGCCCGTTGATCTAATCGTCGATGCCTTCTTTGCTATTGATATAATCTTAACTTTCTTTGTGGCTTACTTGGACAACTCAACCTATCTCCTTATTGATGACCATAAAAAGATAGCCATCAGGTACTTGAAAAAGTTACATCTTCCCATGGACGTAGCAGCAACTCTGCCATTTCAGCAAATATACCAAATTCTAACAGGCAAAACATACGAAAATGATGTCTTCGGTATTCTGAATATGCTCAGGCTTTGGAGATTAAGGCATGTTAGCCAACTTTTTTCAAGGCTAGAGAAAGACATACGAATTAGCTACTCGGCAACAAGATTTTGTAAACTTACATGTGTTACGCTATTTGCAGTGCACTTCGCAGGCTGCATGTATTACTGGTTGGCTGCTCACTACGATGTACCTGGAAAAACATGGATTGGGAAGGAGATGGCAGATTTTAAAGACAGAAGCATCTGGCTGGGTTACACCTATTCCATGTACTGGTCTATTGTCACCCTTACCACTGTTGGATATGGAGATTTGCATGCTGAAAATACAAGGGAGAAAATTTTCACCATCTTCTATATGCTATTTAACATTGGCCTCACTGCATATATAATCGGAAACATAACAAACCTGGTCGTCCATAGCACTGTCCGTACCTTTGCCATGAGGGATGCCATCAACCAAATACTAAAATATGCAAGCAAAAATCGACTACCAGAAGGCTTGAAAGAGCAAATGCTAGCACAAATGCAATTGAAGTTTAAAACAGCAGAGCTACGGCAAGAAAAAGTGCTACAGGACCTGCCCAAGGCAATTAGATCCAGTATCGCTCAGCATCTTTTCCGTAACATAGTTGAAAATGCATATTTATTTGAAGGAGTCTCTGCTGATTTTATCACCCAACTGGTGTCAGAAATGAAAGCAGAATATTACTCACCCAAGGTTGACATTATCTTGCAAAATGAGATGCCATCATATTTCTACATTTTGGTATCTGGAGCAGTGGATGTGTTAAACGACAAGAATGGAACTGAACAGGTAAGATGGAATCCCAAGGTTTTTTCCTCAAAGCTTTTGTTGAAACTAGAATCTGGAGGCATGGCAGGAGACATAGGAGTTATGTTTAATATCCCTCAACCTTTTACAGTGAGATGTAGGAAGCTTTCTCAAGTCATACAAATCAGTCATGATCATTTCAAGCAGATGGTAGAAACATATAGTGATGATGGCAAAGTAATTATCACCAACTTCATTCAGCATCTAACACAAGAAGAGAGCATACCTGATGAAGTTTCAAGTTATCATGAAGGTAATGCATATAAAGAAGGAAGGACAAGAAATTTCAATACACTCTCGGGCCTAGTCCCGACCAGAGTGAAAATTTATGGACATCATCCCAAGGAACACAGAATTGAAAATATGACCTCACAAAAACTCATACTTCTCCCAGATAATAAGGAAGATCTTTTCAAATTAGCAGAACAGCATAAGCAGCTTTCTGAATTTGCTCCTTCTCTTCATCTAAGGCTCTCTTCCTCTCAATAG 1815 0.3994 MSITQIRAALSLLVRRSSSDETSNLASFSSSLLPAFGTNIVDDAYLNRRKYVIAPFDRRYRLWQTSLVALVVYSAWASPFELAFRKGATGWLMPVDLIVDAFFAIDIILTFFVAYLDNSTYLLIDDHKKIAIRYLKKLHLPMDVAATLPFQQIYQILTGKTYENDVFGILNMLRLWRLRHVSQLFSRLEKDIRISYSATRFCKLTCVTLFAVHFAGCMYYWLAAHYDVPGKTWIGKEMADFKDRSIWLGYTYSMYWSIVTLTTVGYGDLHAENTREKIFTIFYMLFNIGLTAYIIGNITNLVVHSTVRTFAMRDAINQILKYASKNRLPEGLKEQMLAQMQLKFKTAELRQEKVLQDLPKAIRSSIAQHLFRNIVENAYLFEGVSADFITQLVSEMKAEYYSPKVDIILQNEMPSYFYILVSGAVDVLNDKNGTEQVRWNPKVFSSKLLLKLESGGMAGDIGVMFNIPQPFTVRCRKLSQVIQISHDHFKQMVETYSDDGKVIITNFIQHLTQEESIPDEVSSYHEGNAYKEGRTRNFNTLSGLVPTRVKIYGHHPKEHRIENMTSQKLILLPDNKEDLFKLAEQHKQLSEFAPSLHLRLSSSQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0776 604 ProSiteProfiles cAMP/cGMP binding motif profile. 380 510 IPR000595 -
Sto5g0776 604 Pfam Cyclic nucleotide-binding domain 400 496 IPR000595 -
Sto5g0776 604 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0776 604 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0776 604 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0776 604 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0776 604 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sto5g0776 604 PANTHER POTASSIUM CHANNEL AKT1 29 587 IPR045319 GO:0005249|GO:0006813
Sto5g0776 604 SUPERFAMILY cAMP-binding domain-like 309 511 IPR018490 -
Sto5g0776 604 Gene3D - 63 304 - -
Sto5g0776 604 SUPERFAMILY Voltage-gated potassium channels 55 302 - -
Sto5g0776 604 Pfam Ion transport protein 61 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto5g0776 604 Gene3D Jelly Rolls 326 517 IPR014710 -
Sto5g0776 604 PANTHER POTASSIUM CHANNEL KAT3 29 587 - -
Sto5g0776 604 SMART cnmp_10 380 508 IPR000595 -
Sto5g0776 604 CDD CAP_ED 380 504 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0776 Sto-Chr5 5285387 5291184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0776 2 585 Ion Channels AT4G32650 55.788 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0776 K21867 - gmx:100794620 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0776 5 5285387 5291184 Sto5g0776 5 5285387 5291184 ECH