Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0757 ATGTTCTCTAGCAGCCAGTTCGATGCCACCTCCGCCTTCTCCGGCGGTGGATTCATGGCCTCACAGGCCACCCAACTCAACGATTCATCCCTATCACCGGCAAGAAGCCGTGAAACTCAGGGTTTGGTTCCGGTAACTGTGAAGCAGATCAGCGAAGCCTCTCATTCTGGTGATGAAAAGCCGAATTTCACAATCAACGGTGTGGATGTGACCAATGTAACCTTGATTGGTATGGTTTATGAGAAAGCCGAGAGAAACACTGATGTTAGTTTCGTTCTAGATGATGGAACAGGACGAATCAAATGTCGAAGATGGGTGAATGAAGCTTTTGACACCAAGGAAATGGAAGAAATACGAGATGGTATGTATGTGCGTCTGTATGGGCATTTGAAAAGCTTCCAAGGTGTAAAGCAAGTTGTTGCTTTCTCAATCAGGCCTGTGAAGAATTTTGATGAGATTTCTTTTCACTTCATTGACTGCATACATAATCACCTCCGCTCCAGAGTGACGGTTGAAGGAACAACTACTGGACATCCCCCTTTGACAGACTCATCTTTGAACACTCCTGTCAGAAATACATCAAATGGATATCAAGCACCATCATCAAATCCGTTATATGCACAATATAGCGTGGATGGACTAAAAGATTGTGATAAATTGGTTCTTGACTATCTGAATCAGCATGAAGACATGTCGGATGAAAGAGGAGTACATGTCGATGAGTTATCTCGAGAGCTTAAACTCCCATTGGACAAGATCATGTTGTCGCTGAAAACGCTTGGGGATGATGGATTAGTCTACTCCACCATTGATGACAATCATTACAAGAAAGCTTGA 837 0.4361 MFSSSQFDATSAFSGGGFMASQATQLNDSSLSPARSRETQGLVPVTVKQISEASHSGDEKPNFTINGVDVTNVTLIGMVYEKAERNTDVSFVLDDGTGRIKCRRWVNEAFDTKEMEEIRDGMYVRLYGHLKSFQGVKQVVAFSIRPVKNFDEISFHFIDCIHNHLRSRVTVEGTTTGHPPLTDSSLNTPVRNTSNGYQAPSSNPLYAQYSVDGLKDCDKLVLDYLNQHEDMSDERGVHVDELSRELKLPLDKIMLSLKTLGDDGLVYSTIDDNHYKKA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0757 278 Pfam Replication protein A C terminal 189 273 IPR014892 -
Sto5g0757 278 Gene3D - 34 168 IPR012340 -
Sto5g0757 278 PIRSF RPA32 1 278 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sto5g0757 278 PANTHER REPLICATION PROTEIN A-RELATED 1 278 IPR040260 -
Sto5g0757 278 SUPERFAMILY "Winged helix" DNA-binding domain 212 276 IPR036390 -
Sto5g0757 278 Gene3D - 208 278 IPR036388 -
Sto5g0757 278 CDD RPA2_DBD_D 72 165 - -
Sto5g0757 278 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 278 - -
Sto5g0757 278 SUPERFAMILY Nucleic acid-binding proteins 42 166 IPR012340 -
Sto5g0757 278 Pfam OB-fold nucleic acid binding domain 73 146 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0757 Sto-Chr5 5155402 5158643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0757 1 276 Core DNA Replication Machinery Family AT2G24490 48.763 3.59e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0757 K10739 - gmx:100802512 438.343