Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0751 ATGGATGAATATTCTGGTAAACGAGCCATTGATGGTGTGGTAGTTCCTAAAAAGGGGATGGCACATGTATTTAGAGATACTGCTAATAGTAGGGACCGTAATGGTCAGTTATGCAGCAGACTTGGTTGTAGCAGCAGAGCGAACCCTTCTAATTCTAAAGGTGCTCAAATTAGTTCTTCTGGAAAAGGTAAATCTTTGAGGTCTTCAATCCAATCTCCTTCAAGTCACAAGGAAGCCATTGGAAGTTCCTCTAGAACTTTACCAGGATCTAGTAACCCAGGAAAATCCCTTATAGGGTCCCAAAAAACATTATCTTCTCGGTTAGAGACAGTTTCATGTGAAACTAGTAGTTTACAGGATGAACCAGAAACTTCAGATCTCATCGCACCTCCTGGAAAAATTCAAAAAGGGCTTCAAGCTGAAGTGGAAAATACAGGGTCTAATAATAATGTTGTATCCATGGAAGTAGGAAGCTCTAGTGTAGCATCAAACACTAGATGTAGGAGGAATCTTCATCAAAAGCCTGGATTGAGTGGTCAAGAAATTAAAGGCGCTGGTTCGGTGACACGTGCCGGAACCAGCAGGTACGGGTTGAGGAACCTCAGATGCAACTCTATATCTGATGTCATCCCGGCGGGTTGTTCGTTATCAGATTCAACCCTTACTAGAAGGAAAGATTtgataaaaaagagaaattgtgAAGGGGAGAGTAGTAGTTCCACTGCTAGAGGTAAAAAGATGAGTGGATCTTCATTGGATGGTCAGAATTGTGGTTCCAGAAATGGCATTTCCATCTCTGACTCAAGAAGATCCAGAAATATTCCTCCTCATAGGGACAACAATGTTGCATCAGTTAGAACTCGGAGATCATTCGGTGCTCAAGGTAGGGGAAGGCTTACTAGCCAAGCAAATGAAAGCCCTGCCCCACCCATTGAGTCCCCTCTCACTATATCACCTTTGCCTCATTCCAGTGACATTAATGCTCATGATTTGTTAAATCAAGCCTCTGTGGAGTCTCCTTTAAGTCATCCAAGATCATTTGGTAGAACAAGTGGTAGCAGTGAGCCGTTATTTGGCGTTATGCCTGCATCTCCTTCAGAATACGGGATTACTCGTTCTCTAATAAATCGAGATAGTTTTCGACGCTACCACATGGATGGTATTGCAGAGGTCTTATTGGCTCTTGAGAGGATTGAACAAGATGAAGATCTTACTCATGAGCAAATTCTTTTGCTGGAGACCAACTTGTTCCTTAATGGTCTAAACTTCTACGATCAGCATAGAGAGATGCGATTGGATATTGATAACATGTCATACGAGGAACTATTAGCTCTGGAAGAGAGGATGGGTTCTGTGAGCACAGCTCTAACAGAGGAAGCAATTTCAAAATGCCTAAAGAAAAGTCTCTATCAATCTGCACCTTCCGACAACGATACAGCCGAGGGTTGCAATGAGGATAAGGATGATGATACAAAATGCAGCATCTGCCAGGAGGAATACGTTGAGAGAGATGAAGTGGGGAGTCTGAAATGCGAGCATAGGCCACTGAGTGGCTTGAGACTCTGGAACTTCTTGTTAAGCTGTGGATGA 1590 0.4258 MDEYSGKRAIDGVVVPKKGMAHVFRDTANSRDRNGQLCSRLGCSSRANPSNSKGAQISSSGKGKSLRSSIQSPSSHKEAIGSSSRTLPGSSNPGKSLIGSQKTLSSRLETVSCETSSLQDEPETSDLIAPPGKIQKGLQAEVENTGSNNNVVSMEVGSSSVASNTRCRRNLHQKPGLSGQEIKGAGSVTRAGTSRYGLRNLRCNSISDVIPAGCSLSDSTLTRRKDLIKKRNCEGESSSSTARGKKMSGSSLDGQNCGSRNGISISDSRRSRNIPPHRDNNVASVRTRRSFGAQGRGRLTSQANESPAPPIESPLTISPLPHSSDINAHDLLNQASVESPLSHPRSFGRTSGSSEPLFGVMPASPSEYGITRSLINRDSFRRYHMDGIAEVLLALERIEQDEDLTHEQILLLETNLFLNGLNFYDQHREMRLDIDNMSYEELLALEERMGSVSTALTEEAISKCLKKSLYQSAPSDNDTAEGCNEDKDDDTKCSICQEEYVERDEVGSLKCEHRPLSGLRLWNFLLSCG 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0751 529 MobiDBLite consensus disorder prediction 231 326 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 277 326 - -
Sto5g0751 529 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 514 IPR045191 GO:0061630
Sto5g0751 529 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 1 514 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 234 270 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 25 131 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 338 360 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 30 123 - -
Sto5g0751 529 MobiDBLite consensus disorder prediction 338 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0751 Sto-Chr5 5088119 5090402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0751 370 513 C3H Transcription Factor Family AT2G15530 42.361 8.07e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0751 - - gmx:100787213 632.484