Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0714 ATGGAGCCTAAACCGGCCGGCGTTATGGCTGCCTTTCCTACCTCTCAATCTCACGCGTCCTCATCGATCTTCTCCGGCGGCGGAGATTTTGCACGGATCCCGTCGGAGTGGGATCTGGAAGAGTTTATGAATAAGGTGGTGATCGTTCCGGAAATAAGCAATGGATGTGGATCCGTGAACGATGACGACGTCAAAACAGGCGACTTCCGGACTCTGAGAGACAAAGATTTCGCCGACGCCGTTGCATTTCTCGGCGACCTCGACGCCGCCTTCCGAAATCCGGATACAGAGAGTGGATTTTCAACGTACGGTGGTGGACTAGCAGACGACATTTTGTGGACCCAAAACGACTTCACTCCCAAGCATTCGCCCATCTCCGCTACTATTGAGTCTCAATCGTCCATTTGCTGTACTGTTGGAAGCCCAGTGTCAGCTAATTATAAACCAAACCCAAGAGATAATCAAGCAAAAGGAACTTCAAGTGGTTCCTCGCAAGACCACTCTGATGCCGATGATGATGAAGCAGGTCCTTGTGAACAGAGCATTATTGACCCCACTGATAAGCGGGATAGAAGGAAGAAATCTAATCGGGAGTCCGCAAGGAGatcaagaagaagaaagcaAGCGTATATGAGAGATCTTGAGTTGCAGGTTGATCAACTGAGAGTGGAAAACGCAACCCTATACAAGCAGCTTACAGATGCCGATCAACAATTTCGTGATGCTGATACAAATAACCGAGTCCTCAAATCAGACGTCGAAGCTTTGAGAGCTAAGGTGAAATTAGCTGAAGATATCGTTGCTCGTGGCTCCTTAACCACATTAAACAACCAGATTTTTCAGAACCAGAGTCACCACCACATGAGCCCACCACTTACCACTACTGGTCTGCGCCGAACAGCACATGTGTCACCAACCATTACTGTCCAAGGAAATGATACCACATATGCTGCTATCACACAGAATCCAGGTATTGGACTAGCAAACTTGGATATCACTAACACCAATTTCAACACTACTGGGGTCATAAGCGATGCGGTGAGCTGTGTGACCGATGATATGTGGGCACCATAA 1074 0.4739 MEPKPAGVMAAFPTSQSHASSSIFSGGGDFARIPSEWDLEEFMNKVVIVPEISNGCGSVNDDDVKTGDFRTLRDKDFADAVAFLGDLDAAFRNPDTESGFSTYGGGLADDILWTQNDFTPKHSPISATIESQSSICCTVGSPVSANYKPNPRDNQAKGTSSGSSQDHSDADDDEAGPCEQSIIDPTDKRDRRKKSNRESARRSRRRKQAYMRDLELQVDQLRVENATLYKQLTDADQQFRDADTNNRVLKSDVEALRAKVKLAEDIVARGSLTTLNNQIFQNQSHHHMSPPLTTTGLRRTAHVSPTITVQGNDTTYAAITQNPGIGLANLDITNTNFNTTGVISDAVSCVTDDMWAP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0714 357 Coils Coil 246 266 - -
Sto5g0714 357 PANTHER BASIC LEUCINE ZIPPER 63 30 355 - -
Sto5g0714 357 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Sto5g0714 357 Coils Coil 204 238 - -
Sto5g0714 357 Pfam Basic leucine-zipper C terminal 255 332 IPR020983 -
Sto5g0714 357 PANTHER BASIC LEUCINE ZIPPER 9 30 355 - -
Sto5g0714 357 SUPERFAMILY Leucine zipper domain 188 238 IPR046347 GO:0003700|GO:0006355
Sto5g0714 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Sto5g0714 357 MobiDBLite consensus disorder prediction 146 211 - -
Sto5g0714 357 Pfam bZIP transcription factor 186 234 IPR004827 GO:0003700|GO:0006355
Sto5g0714 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Sto5g0714 357 Gene3D - 187 242 - -
Sto5g0714 357 MobiDBLite consensus disorder prediction 146 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0714 Sto-Chr5 4871241 4873708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0714 103 355 bZIP Transcription Factor Family AT5G24800 50.000 1.80e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g0714 bZIP_C 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0714 K25784 - fve:101302614 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0714 5 4871241 4873708 Sto5g0714 5 4871241 4873708 ECH