Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0695 ATGGAAAGTGACAGGACAACGCCTGCTCCATCAGATGGGCTCAGTGATGGTATTCAGAAAATCAGACCACTGCATGGGCGGACTAGTGGCCCTACAAGGCGTTCTACAAAAGGACAATGGACTCCTGAAGAGGATGAGATTTTGCGGAAGGCTGTTCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGcGGAGTGTTTCAAGGATAGAACGGATGTACAATGCCTACACAGGTGGCAGAAAGTCTTAAATCCCGAACTGGTCAAAGGTCCTTGGTCCAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGGCCAAAAAAGTGGTCTACTATTGCTCAGCACTTACCTGGACGTATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACCCAAGAAGAGGAGTTGGCCTTAATACGTGCGCATCAAATTTATGGGAACAGATGGGCAGAATTGACGAAGTTATTGCCTGGAAGGACAGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAGTTGGATTCTTACTTGGCGTCAGGTTTGCTTCATCAGTTTCAAGATGTAAGCCATGTTGCACATCCAAACCAACCCATGGTTTCTACCTCTTCAAGGTTGCAGTGTAGTGGAGATGATAATAGTCATAAGGGCACTGAAAAAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCAGCTATTGTTAGTTGCTTTCCATCTGCCCAAGGGATGATGAATGTTGTTTTACATAATCCTGAGGAATTCAACCCGAATGAAGACTTCAGTCTAGGAAAGGAGCACAGTCCAGGTCAAGCATCATGTTCAGAGCATTATTACGTTTCTTTGGATGATGTTACTATATCCATCCCAGACATAGCTCCTGAAGAGGCTTCTTGTTCTCAATTCTTTGAGGTAAAACACTCACATGATCCTGGAAATTCTGCAAGCAAGTATAGTCAGTTTAACTTACATGCCTTACCAAACATTTCTTCATTTGACTTGGATCAGGAATCCTTAGTTTTGCAAAGAGATGGTGTAGCTTGTGATGAAAGCCATGACATTGTGAATGTTCCATTTCATACTTCAGCGGGGTTAGGTGATTCAACATCCATGGGACCCACATATGTGGATTCTGCTAAACCGGAGCACTTGTTAATATCTGATGAAGAATGTTGTAGAATCTTGTTTTCAGAAGCAATAAATGATGGATGTTTGTCCTCAGGAGATAACAGAGGTGTTCATATGGTTTTGTCTGGGTGCACTTCATTTCTTTGCCAATCTTCTGACATACAGATATCTGAAGCTGGTGAAACCTCAACTGCACTCCTTACTGGTCCATCAAAGTCTAATAATTTGATAGGATCTTCATGCTCCCGATCTTTGGTGCTTTCTGCTAATGATGTTAGACTCTATACAACTGAAGCTAATCAATTAGTTGGAGCTGATGATCTGCAGTTTGTCTCCAGAGTTCATGATAGCTTTATTTACACCAACAATTCATCCATTTCTCCTTGTATTGATTTAGATAACACAGAAATACATGAGGGACCAGATATTATGACGGATGCTTCAAGATTGGTTCCAGTAAATACTTTTGGCTATGCATTAGATACCAAGCAAACTTGTTATCCAATGGATGAAAAGACAAACGTGCATGTGGAGCAGGTGGACAGAGGAGCTTTATGTTATGAACCTCCTCGATTTCCAAGTCTAGATATTCCTTTCTTCAGCTGTGATCTTATACAATCTGGAGGTGATATGCAGCAAGAATTTAGTCCATTGGGTATCCGCCAACTTATGATGTCTTCTATGAACTGCCCAACTCCCCTGAGATTGTGGGATTCACCTTCTCATGATAATAGTCCAGATGCTTTGCTGAGAAGTGCAGCTAAAACTTTCACAGGTACACCATCCATTTTAAAGAAACGTCACCGGGACTTGTTATCGCCTTTATCAGATAAGAGGATTGACAAGAAACTTGAGACTGACATGACATCCACATTGACTTCACACTTTTCACGTTTGGAGGTCATGTTTGACGACAATGAAACTCAGAAAGCGGATATGCTTTCTCCATCTTCAACACAGAAAGAGAAGTTTGGAGCCACTGTTGAGGATAAAGAAAACTGTGGATCATCTTTGAAAGAGGAACATGCAGAAGGAAGAAATGAATACACAATTTTGAGCAACAGAAATTTAGAAATCGAGATCAGAGATAGTAATTCTCAGGATTTCCGGCAGCCTCTTGATGTTGATTCGAAGACGAAGGTTGACATTGACATTGATTCAGCTGCTGAGATTGTGCAACAGTCTTCTGGAGTCTTAATTGAACATGATATGAATGACATGCTATTGTATTCTCCAAACCAACTAGGCTCTGAACCGGACAGAATTAGCTGTTTCAGTGTTAAAACCCCGAAAAACCTGAACAGCAGAAGCTTAGAAACAGCTCCAAATAAGAGCATTTTTTCAAATCCATTCTCAAGGGTTAGCTCCCCATGTGTTCGTGTAAAAAATCATGAAGTTCCTTCAGTTCCAATTACTTGTTTAGAATCTCTTTGTTCACCAGCCCCTGCGGAGAATTCTGTTAATCATACGGGAAATGATGCTGGTTTTGAAACATTTAgcatATTTGGTGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCTCCTTGGTTCATTAACACATTTCTCTCAAGCCCCAGAGTTGATACTGGAATAACAATTGAGGATTTTGGGTATTTCATGAGCCCTGGCGATAGAAGCTATGATGCAATTGGGTTGATGAAACAGGTCAAGGAACAAACTGCTACTGCATACGCCAATGCTCAGGAGATTTTGGAGAAGGAAACTCCCAAAGCAAGAGATGCTTCTGGAAATTTCAGGGATGTGGACCAGGAAAACAAGGATCCTCATAATCAGCCTGGGAATTCTTCTCAGTTGCCCTCAAATGCTTTGATAGAGCGACGCATACTTGACTTCAGTGAATGTGAAACACCAGCGAAAGAGGAGGGTAACAGCAAATCCTCTGCCCTGACCTTCTCAAGTCCTTCTTCATATTTGTTAAAAGGCTGTAGATAG 3138 0.4092 MESDRTTPAPSDGLSDGIQKIRPLHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNRWAELTKLLPGRTDNAIKNHWNSSVKKKLDSYLASGLLHQFQDVSHVAHPNQPMVSTSSRLQCSGDDNSHKGTEKEEVSECSQESAIVSCFPSAQGMMNVVLHNPEEFNPNEDFSLGKEHSPGQASCSEHYYVSLDDVTISIPDIAPEEASCSQFFEVKHSHDPGNSASKYSQFNLHALPNISSFDLDQESLVLQRDGVACDESHDIVNVPFHTSAGLGDSTSMGPTYVDSAKPEHLLISDEECCRILFSEAINDGCLSSGDNRGVHMVLSGCTSFLCQSSDIQISEAGETSTALLTGPSKSNNLIGSSCSRSLVLSANDVRLYTTEANQLVGADDLQFVSRVHDSFIYTNNSSISPCIDLDNTEIHEGPDIMTDASRLVPVNTFGYALDTKQTCYPMDEKTNVHVEQVDRGALCYEPPRFPSLDIPFFSCDLIQSGGDMQQEFSPLGIRQLMMSSMNCPTPLRLWDSPSHDNSPDALLRSAAKTFTGTPSILKKRHRDLLSPLSDKRIDKKLETDMTSTLTSHFSRLEVMFDDNETQKADMLSPSSTQKEKFGATVEDKENCGSSLKEEHAEGRNEYTILSNRNLEIEIRDSNSQDFRQPLDVDSKTKVDIDIDSAAEIVQQSSGVLIEHDMNDMLLYSPNQLGSEPDRISCFSVKTPKNLNSRSLETAPNKSIFSNPFSRVSSPCVRVKNHEVPSVPITCLESLCSPAPAENSVNHTGNDAGFETFSIFGGTPFRRSIESPSAWKSPWFINTFLSSPRVDTGITIEDFGYFMSPGDRSYDAIGLMKQVKEQTATAYANAQEILEKETPKARDASGNFRDVDQENKDPHNQPGNSSQLPSNALIERRILDFSECETPAKEEGNSKSSALTFSSPSSYLLKGCR 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0695 1045 MobiDBLite consensus disorder prediction 1 42 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 990 1004 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 967 989 - -
Sto5g0695 1045 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Sto5g0695 1045 Gene3D - 36 88 - -
Sto5g0695 1045 Gene3D - 142 203 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 966 1004 - -
Sto5g0695 1045 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Sto5g0695 1045 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Sto5g0695 1045 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Sto5g0695 1045 CDD SANT 143 183 IPR001005 -
Sto5g0695 1045 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Sto5g0695 1045 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Sto5g0695 1045 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Sto5g0695 1045 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Sto5g0695 1045 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 1044 - -
Sto5g0695 1045 CDD SANT 40 83 IPR001005 -
Sto5g0695 1045 PANTHER MYB PROTEIN-RELATED 6 1044 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 211 237 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 211 227 - -
Sto5g0695 1045 SMART sant 36 85 IPR001005 -
Sto5g0695 1045 SMART sant 88 137 IPR001005 -
Sto5g0695 1045 SMART sant 140 188 IPR001005 -
Sto5g0695 1045 Gene3D - 89 140 - -
Sto5g0695 1045 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 1016 1045 - -
Sto5g0695 1045 MobiDBLite consensus disorder prediction 1023 1039 - -
Sto5g0695 1045 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Sto5g0695 1045 CDD SANT 91 135 IPR001005 -
Sto5g0695 1045 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0695 Sto-Chr5 4713022 4718366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0695 5 1045 MYB Transcription Factor Family AT4G32730 44.362 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto5g0695 Myb_DNA-binding 3.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0695 - K09420 aprc:113848458 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0695 5 4713022 4718366 Sto5g0695 5 4713022 4718366 ECH