Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0683 ATGGAGAGGATCATCGGAGGGAAGTTTAAGATGGGTCGGAAGATAGGGAGCGGGTCGTTCGGGGAAATTTATATTGCTGCCAATATCGAGACTTCTGAGATTGTGGCCGTCAAGATGGAGAGCAAGAAGACTAAACATCCACAACTACTGTATGAGGCCAAGTTGTATAATATTCTTCAAGGAGGAAGTGGTATACCAAGTATGAAATGGTGTGGCATTGATGGAGACAATAATGTTCTAGTTATTGATCTTCTCGGACCAAGTCTTGAGGACCTTTTTGTATACTGCGGCAGGAAGTTTTCATTAAAAACAGTTTTAATGTTGGCTGATCAGATGCTTACAAGGATAGAGTATTTGCATTCTAAAGGATTTTTGCATAGAGACATCAAACCAGACAACTTCCTTATGGGGCTAGGGAGGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTTGCAAAAAGATACAAGGATCCTACCACAAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGCACCGCACGTTATGCTAGTTGCAATACTCATTTAGGAATTGAGCAAAGTAGACGGGATGATTTGGAGTCTCTTGGCTATCTTCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGCCTGAAAGCTTCCaataaaaagcaaaaatatgaCAAGATTTGTGAGAAGAAGTTATCCACTCCTATTGAGATCCTCTGCAAGTCTTATCCTGTGGAATTTGCTTCTTACTTCCATTATTGCCACACTTTGACATTTGATCAACGGCCAGATTATGGATTCTTGAAGCGTCTGTTTCATGATTTATTTACTCGTGAAGGATATGAGTCTGACTACATATTTGACTGGACCATTCTCAAATATCAGCAATCAAAACAGACGAAGATGAAGGAACAATCAACTCCTGCTGCTGATGTGCCTAGAAGTCTAGAGCCTAATGTTGCAGATAAGCATAGAGCAGTCAATGGCTCTGCTCAAATTGCTGAGCCAAGACCATCAACAAACGTTAATGCACGGGTTAATATGCACATTAGGTCATCAGGTGATCAGAATATGAATGCCGGGAATCAGATTGGGAAACCTAGTGTCAAAAATGGTCCATCTACTTCATCTGCCAGACCCAGATGCGCAGAAGATGTATCAAAACCagagaaaccacttggaagttcCAACTTGAGTCGTGTATTTGGGCATAACACGGACTGGGGGCTTTGGAAGGAGCCAGTTGAACGTGTTTTGTTGCAAAAGTGTCATGACACACTCACTTCACCAGAAAGAATGGTAAACTGTGATACCATAAAGGATCTTCATGTGATGCCAAATGCATCCCCTGGTGGACAGAGAATGAGTGGGGCCATTAGAGGCCAGGCGAAGGGTTATCGGCTATCAAGGGAAAAATCTGGGAAACATATTTTCTAA 1440 0.4062 MERIIGGKFKMGRKIGSGSFGEIYIAANIETSEIVAVKMESKKTKHPQLLYEAKLYNILQGGSGIPSMKWCGIDGDNNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYLLMYFLRGSLPWQGLKASNKKQKYDKICEKKLSTPIEILCKSYPVEFASYFHYCHTLTFDQRPDYGFLKRLFHDLFTREGYESDYIFDWTILKYQQSKQTKMKEQSTPAADVPRSLEPNVADKHRAVNGSAQIAEPRPSTNVNARVNMHIRSSGDQNMNAGNQIGKPSVKNGPSTSSARPRCAEDVSKPEKPLGSSNLSRVFGHNTDWGLWKEPVERVLLQKCHDTLTSPERMVNCDTIKDLHVMPNASPGGQRMSGAIRGQAKGYRLSREKSGKHIF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0683 479 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 408 - -
Sto5g0683 479 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0683 479 MobiDBLite consensus disorder prediction 353 399 - -
Sto5g0683 479 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Sto5g0683 479 PANTHER CASEIN KINASE-RELATED 1 408 - -
Sto5g0683 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sto5g0683 479 MobiDBLite consensus disorder prediction 353 382 - -
Sto5g0683 479 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0683 479 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto5g0683 479 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0683 479 Gene3D Transferase(Phosphotransferase) domain 1 1 341 - -
Sto5g0683 479 MobiDBLite consensus disorder prediction 448 479 - -
Sto5g0683 479 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0683 Sto-Chr5 4622261 4627868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0683 9 236 AGC Kinase Gene Family AT3G08730 26.724 2.56e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto5g0683 Pkinase 4.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0683 K08960 K08959 gmx:100810377 640.573