Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0671 ATGGAGGATGGGGCAAAGCATGCAGGGTGTGACAAAGACCACACACTGTATATTCCTTCGAGAAAGGCAGAGTGGGCTTCCATCAATGACCCGATTGGCTTTCTCTCCAACTGGATCGTCGTCAACTCCTCTTCCACTACTATCTGCCACTGGTACGGCATCACCTGCCGCCACAACTCCTCCGGCGTGAACGCCGTCCACCTCTCCGGCAAAAACATCACCTCCAAATCCAATACTAGCGTATCAATATCCTCCATATTTCAACTTCCGCACGTCGAACACATCGACCTCTCCGACAATCAGCTGTCTGTGGGTTGGGAAATCACCAATTTCACGTCTCCCTCCCCACTCCGCTATCTCAATCTCAGCAACAACAACTTCACGGGTTCGTTGCCTCGGGGTTTGTTTACGGCGTCGTTTTCCCTCATTCAGACTCTGGATCTCTCCAACAATATGTTTTCAGGGGAGATACCGCACCAAATTGGGAAGCATTTTTCGAGCCTGACGTATCTTGATCTTGGAGGCAACGTTTTGGTAGGGAACATTCCAGATTCCATCACCAACATGACCCGTTTACAGTACTTGACTCTTGCTTCCAATCAACTATGGGGTGAAATTCCTCAACAGATAGGGCTAATGAAGAGCTTGAAGTGGATTTACCTTGGGTACAACAATCTCTCAGGTGAGATTCCGCAGGGAATCGGGGAATTAATCTCTTTGAATCATCTTGATCTTGTTTACAACAACCTCACAGGCCAAATCCCTCGCTCATTCGGGAATCTCACTAATCTTGAGAATCTCTTTCTCTACCAAAACAAGCTCACGGGCCTAATTCCTCCCTCTGTTTTTGAGCTGAAGAAGCTTGTTTCGCTCGATCTCAGCGATAATTTCCTACGCGGTGATATCCCCGAGCTTGTGATTCAGCTTCAGAGACTAGAGATTCTGCATCTTTTCTCCAACAACTTCACCGGAAGAATCCCAAACGCCTTAACCTCTCTGCCTCGCCTTCAAGTGCTTCAGCTATGGTCCAACGGATTCACGGGTAAGCTTCCAGGAGATCTCGGAAAGCGTAACAACCTCACTGTTCTGGACCTTTCCTCCAATAACCTTTCGGGGGTAATCCCGGATAGCTTATGCCACTCTGGCAATCTTTACAAGCTTATCCTCTTCTCGAACTCTCTAGAAGGACCCATACCGAATAGCTTAACCTCTTGCTTAAGCCTGCGCCGAGTTCGTCTTCAGAACAACAAGCTCTCTGGTGAATTACCAACCCAACTGACTCAGTTGTCGCAGATATACTTTTTGGACATCTCAAGTAATCGACTCTCCGGCAGGATTGATGATCGGAAGTGGGACATGCTGGCGCTTCAGTTGCTGAATTTGGGCAGCAACAATTTCTCCGGTGAGTTACCGGTTTCTTTTGGGAGTAAGAACTTGGAGAAACTGGACTTATCCGGAAATCGATTTTCGGGGTATATTCCACGTGGGGTTGGAAGGTTAGCAGAGCTGATGGAATTGAAGCTGAGCAACAACGAACTACATGGGGATATCCCAGAGGAAATCACTCTGTGCAAGAAGCTAGTGGTTTTAAATGTTAGCCATAATGATCTTAGTGGAAAAATTCCGACGAGCCTGGGGGACATGCCGGTTCTGAGCTTGCTTGATTTGTCACAAAACCAATTGAGTGGTGAAATTCCAGAGAATTTAGGAAAAGTGGAATCTCTAGTTCAGGTGAACATATCGCACAACCATTTTCACGGACAATTACCGGCCACCGGAGCTTTCCTCGCCATTAATGGAAGCGCGGTCACCGGTAACGACCTATGTGGCGACACATGGAGCGGGTTGCCGCCATGCAAGAAAAGCAGTAAGAATGGGCGGAGGTGGCGGGTTGTTGTGTTGTGGTTTGTGATGATGGGAGTAGTGGGGTTTGGTTTGGGAGGTTGTATGATTGTTTATGtgggaagaagaataagaaaaaaGTTGGAGGTGAAGAGAGTGGAAAGCAAAGATGGTAGGTGGGAAATGGAATTTTTGGACTCGAAGGCGGCGAAGTTGATCAGCATGGAGGAGGTAATATGGTCGGCGAAAGAAGGGAAGGTGATAAGTAAAGAGAAGAGGAGGGGTTGGTATGAAGGGAAGTGGAATATGAATGAGGTGATGCAAATGGAGGTGAAGGAGATGAGGGAGGTGAATTGGGGTGCGTTAGTGGAGTTGGGTAAGGTTGAGCATTCGAACGTGGTTAAATTGATGGGAATGTGTAGGTGTGGGAAGGGAGGGTACTTGGTGTACGAGTATGTGGAGGGAAAGAGGCTGAGGCAAGTATTGAGCGACATGAATTGGGAAAGGAGACGGAGAATAGCAGTTGGGATTGCAAAAGCACTCAACTATGTGCATGCTCACTGCTCAGCTAGTGTTTTGGTTGCTGAGATGTCGGCGGAGAGAGTTTTGATAGACGCCAATGACGTACCTCGCCTGAAGTTAAGCCCAGAAGCAAGGAGTGGGAAGGAGAAGAGTAGTGAGATATATGGAATGGGGGTTATTCTGATGGAGATATTGACGGGAAGAAATCCAGaaatggaggaggaggaggggatagTGGAGTGGGCCCGGCAGAGGCAGGAGCAGAAGGAAATGGTGGAGACAATGAGCGTGGCGCTGCAGTGCACAGCGAGTGATCCCGCAGCGAGGCCATGCGCCACTCGCGTCTTCAAAACCCTATCTGCTCTCTCTTCCACAACCACTCTTTCCTCCTGTCTTTTTCCACTCAACCCCTGA 2778 0.477 MEDGAKHAGCDKDHTLYIPSRKAEWASINDPIGFLSNWIVVNSSSTTICHWYGITCRHNSSGVNAVHLSGKNITSKSNTSVSISSIFQLPHVEHIDLSDNQLSVGWEITNFTSPSPLRYLNLSNNNFTGSLPRGLFTASFSLIQTLDLSNNMFSGEIPHQIGKHFSSLTYLDLGGNVLVGNIPDSITNMTRLQYLTLASNQLWGEIPQQIGLMKSLKWIYLGYNNLSGEIPQGIGELISLNHLDLVYNNLTGQIPRSFGNLTNLENLFLYQNKLTGLIPPSVFELKKLVSLDLSDNFLRGDIPELVIQLQRLEILHLFSNNFTGRIPNALTSLPRLQVLQLWSNGFTGKLPGDLGKRNNLTVLDLSSNNLSGVIPDSLCHSGNLYKLILFSNSLEGPIPNSLTSCLSLRRVRLQNNKLSGELPTQLTQLSQIYFLDISSNRLSGRIDDRKWDMLALQLLNLGSNNFSGELPVSFGSKNLEKLDLSGNRFSGYIPRGVGRLAELMELKLSNNELHGDIPEEITLCKKLVVLNVSHNDLSGKIPTSLGDMPVLSLLDLSQNQLSGEIPENLGKVESLVQVNISHNHFHGQLPATGAFLAINGSAVTGNDLCGDTWSGLPPCKKSSKNGRRWRVVVLWFVMMGVVGFGLGGCMIVYVGRRIRKKLEVKRVESKDGRWEMEFLDSKAAKLISMEEVIWSAKEGKVISKEKRRGWYEGKWNMNEVMQMEVKEMREVNWGALVELGKVEHSNVVKLMGMCRCGKGGYLVYEYVEGKRLRQVLSDMNWERRRRIAVGIAKALNYVHAHCSASVLVAEMSAERVLIDANDVPRLKLSPEARSGKEKSSEIYGMGVILMEILTGRNPEMEEEEGIVEWARQRQEQKEMVETMSVALQCTASDPAARPCATRVFKTLSALSSTTTLSSCLFPLNP 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0671 925 Pfam Leucine rich repeat N-terminal domain 26 56 IPR013210 -
Sto5g0671 925 Pfam Protein kinase domain 739 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0671 925 SMART LRR_typ_2 140 164 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 189 213 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 359 380 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 261 285 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 548 572 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 309 332 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 117 138 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 237 260 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 500 524 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 453 476 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 89 115 IPR003591 -
Sto5g0671 925 SMART LRR_typ_2 333 357 IPR003591 -
Sto5g0671 925 ProSiteProfiles Leucine-rich repeat profile. 359 380 IPR001611 GO:0005515
Sto5g0671 925 Gene3D Transferase(Phosphotransferase) domain 1 690 828 - -
Sto5g0671 925 SUPERFAMILY RNI-like 81 371 - -
Sto5g0671 925 SUPERFAMILY Protein kinase-like (PK-like) 738 910 IPR011009 -
Sto5g0671 925 PANTHER LEUCINE-RICH REPEAT PROTEIN, PLANT-TYPE-RELATED 26 909 - -
Sto5g0671 925 SUPERFAMILY L domain-like 328 590 - -
Sto5g0671 925 PRINTS Leucine-rich repeat signature 360 373 - -
Sto5g0671 925 PRINTS Leucine-rich repeat signature 548 561 - -
Sto5g0671 925 Gene3D Ribonuclease Inhibitor 23 303 IPR032675 -
Sto5g0671 925 Gene3D Ribonuclease Inhibitor 304 623 IPR032675 -
Sto5g0671 925 Pfam Leucine Rich Repeat 117 134 IPR001611 GO:0005515
Sto5g0671 925 ProSiteProfiles Protein kinase domain profile. 636 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0671 925 Gene3D Transferase(Phosphotransferase) domain 1 829 919 - -
Sto5g0671 925 Pfam Leucine rich repeat 239 296 IPR001611 GO:0005515
Sto5g0671 925 Pfam Leucine rich repeat 334 394 IPR001611 GO:0005515
Sto5g0671 925 Pfam Leucine rich repeat 478 537 IPR001611 GO:0005515
Sto5g0671 925 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Sto5g0671 925 PANTHER UNNAMED PRODUCT 26 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0671 Sto-Chr5 4525076 4529867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0671 26 907 Receptor kinase-like Gene Family AT2G25790 49.568 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Sto5g0671 Pkinase 7.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0671 - - gmx:100777118 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0671 5 4525076 4529867 Sto5g0671 5 4525076 4529867 ECH