Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0665 ATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGGCATTACataacccaaaccccaatccgaTTACCCAACCACAGAATCCCACGGTAAGAACACGCCAGAGGAGGAGAACCACCGCGCACTACAGGAAGAATCGGAAGCAGGAAGACACGATCGGAGTCgatgaaattaataatattgtgAATAAGGACGTAGGTGCACTTCCTGAGACGGGGACGTTGAGAGAcaaggaagaagagaaagaacaaGGACAAGCGCCAGACGTACCGCTTAGGGTTCTGAGAGAGGAAATCGGCGATAAAGCCATGGATGAGTACGACAGTGGTGGTCGAAGCCCCGATAAGGCTCCTGCTGCCGAAGATGATGGCAGCACGGCTCCGTTACCTGAGAAGGTCCAGGTTGGTGGTTCGCCAGTGTACAGAATTGATAGAAAATTAGGGAAAGGAGGATTTGGACAAGTCTATGTTGGTAGGCGTGTTGGAGCAACAAATCCAAATGAAAGAACTGGTCCTGGAGCTGTAGAGGTAGCCTTGAAGTTTGAGCATAGAAGCAGCAAAGGGTGCAACTATGGACCACCATATGAGTGGCAGGTTTATAATGCGCTGGGTGGTAGTCATGGTGTTCCAAAAGCTCATTACAAGGGGAGGCAAGGTGATTATTATATCATGGTAATGGATATGCTTGGCCCTAGTCTATGGGATGTATGGAATAACAACTCACACACGATGTCCATAGAAATGGTCGCTTGTATAGCAATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAGAGGATATGTTCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCCCCCCTGGAACTCCTGATGAGAAGAAGCTGTTTCTTGTTGATCTTGGATTAGCTACCCGGTGGCGTGATAATTCTACTGGCCTTCATGTTGAGTATGATCAACGGCCAGATGTATTTAGGGGGACAGTTCGGTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGAAGAGATGACTTGGAATCTCTTGCTTACACACTTATCTTCCTTCTTCGTGGTCGGCTTCCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAGATGGCAACATCTCCAGAAACTCTCTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAGTATGTGGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCGAAGTATATATCCCTTTTTGATGGAATTGTTGGTCCAAATCCAGACATCAGGCCAATAAATACTGAGGGCGCTCAGAAAGTTGGTCATAAGAGAGGACGATTGACCATGGAAGAGGATGACGATGAACAACCTAAGAAGAAGGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTTTACAATGCTCGTCGACCCATGAAGCAAAGGTTTttgttatctttctttctttcttttgtcctCAAGTATCATTACAATGTTGCTGATGTGCGGTTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATCAGCAGTGTGGCCTCTTGTTCCAATCTTTGGGCCCTTATTATGGATGCTGGCACAGGTTTCTCAGCACAAGTTTATGAACTTTCACCTTATTTTCTTCACAAGGAGTGGATTATGGAACAgtgggaaaaaaattattacatcaGTGCCATAGCAGGTGCTAATAACGGGAGCTCATTGGTTGTAATGTCTAAAGggacccaGTACTTGCAACAGTCCTATAAAGTCAGTGATTCATTTCCATTCAAGTGGATTAATAAAAAATGGAGAGAAGGGTTTTATGTCACTGCCATGGCTACTGCCGGTAGTAGATGGGCAATTGTCATGTCCCGTGGAGCAGGATTTTCTGATCAGGTTGtggaacttgattttctatatCCCAGTGAAGGTATTCATCGAAGGTGGGATAATGGTTACCGCATCACATCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAACCGATGAAACTCAAGAGACACTTCGTACATCTGCTTTCCCTAGTACGCATGTTAAGAATGTGGCTGACATCAATTTGACTTATCTGCTGGAACTGAAGTCTCACTCTGAGAAGTTTTCAAACAAGTGCAGTTCTGCTTTGATTTTGGAAGGCATGTACATAGCCTATCTGACTTTGACAATATCACTTCACTATTCTAACCACTTTTTGCTTCCACACCAAGCTTCTGTTCCAGACATTTGGGtgATTTGCCACATGCTGGTTTCTAAAACCACAGTGAATGATGCTGTACCAACCCATTCAGTGGCTGTTTATGGAATTCGAGTTTTTGGAACTATTTACTGTTGTATTCGGGTTCAGTTCTTTCAGTGGTTTATTTATGTGTGGAATGAATGTGCTTTTGCTGACATAATAGAAGCGAACACAACCTACATTGAACACGAACACGAGAATGTAGGCAGGCAGTTCAGAATTGAGATGGGTTGTCTTAAAAGCTGTTTCATATCTGCAAATGGAGATCTCATTCAGAACCTAATTTATCTGGGTGCTCATTTCAGGACCTACCATATGATGGCTACATCATTGAGCAACCAACAACCAGAGAAATAG 2640 0.4182 MPELRSRARRNRALHNPNPNPITQPQNPTVRTRQRRRTTAHYRKNRKQEDTIGVDEINNIVNKDVGALPETGTLRDKEEEKEQGQAPDVPLRVLREEIGDKAMDEYDSGGRSPDKAPAAEDDGSTAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRVGATNPNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPKAHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRFLLSFFLSFVLKYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSAQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPTDETQETLRTSAFPSTHVKNVADINLTYLLELKSHSEKFSNKCSSALILEGMYIAYLTLTISLHYSNHFLLPHQASVPDIWVICHMLVSKTTVNDAVPTHSVAVYGIRVFGTIYCCIRVQFFQWFIYVWNECAFADIIEANTTYIEHEHENVGRQFRIEMGCLKSCFISANGDLIQNLIYLGAHFRTYHMMATSLSNQQPEK 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0665 879 PANTHER CASEIN KINASE-RELATED 96 689 - -
Sto5g0665 879 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Sto5g0665 879 MobiDBLite consensus disorder prediction 70 86 - -
Sto5g0665 879 MobiDBLite consensus disorder prediction 16 33 - -
Sto5g0665 879 MobiDBLite consensus disorder prediction 437 457 - -
Sto5g0665 879 SMART serkin_6 140 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0665 879 Gene3D Transferase(Phosphotransferase) domain 1 112 465 - -
Sto5g0665 879 SUPERFAMILY Protein kinase-like (PK-like) 140 420 IPR011009 -
Sto5g0665 879 MobiDBLite consensus disorder prediction 1 134 - -
Sto5g0665 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Sto5g0665 879 MobiDBLite consensus disorder prediction 93 118 - -
Sto5g0665 879 CDD STKc_CK1 140 416 - -
Sto5g0665 879 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0665 879 ProSiteProfiles Protein kinase domain profile. 140 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0665 879 PANTHER - 96 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0665 Sto-Chr5 4486284 4492833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0665 252 416 MAP Kinase Kinase Kinase AT5G50180 28.144 5.43e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Sto5g0665 Pkinase 8.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0665 - - zju:107420390 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3160 9 32139691 32144446 Sto5g0665 5 4486284 4492833 CCT
Sto5g0665 5 4486284 4492833 Sto5g0665 5 4486284 4492833 ECH
Sto5g0665 5 4486284 4492833 Sto9g3160 9 32139691 32144446 ECH