Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0664 ATGATGATGTCCTTCAAGAGGCAAAGATGCAATTTTCTGAAGCAGGTCTTGAACTGTGGAGAAGTAGGAAGAAAATTTGTGGCATTAATGTCCAGCACCTTGAAGGAGATGAGGAACGGCGGCGTTTCAGCGGGTGTTAGGGACTTGTATGTCGAGGATAGCTCCACGGAGGATGAGCTTATCACTCCCGGCACTTTTTCTGTGGCCAGTGGCTGCACCTTGCTGCGTGATCCACGCTACAACAAAGGACTTGCCTTCactgagaaagaaagagatgcTCATTACTTGCGTGGCCTTTTGCCTCCGGCTATTCTCTCTCAGGAGCTTCAGGAGAAGAGGATGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGATACACGGCCTTGATGGATCTCCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTTTGATTGATAATGTTGAAGAATTGCTTCCTATTGTTTACACCCCAACGGTTGGAGAAGCCTGCCAGAAATACGGAAGCATTTTTAGGCGTCCTCAGGGTCTCTATGTCAGCTTGAAGGATAAAGGCAAGATCCTTGAAGTATTGAAAAACTGGTCAGAAAAGAACATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATTTTGGGACTTGGAGATCTTGGTTGCCAGGGAATGGGGATTCCAGTTGGGAAACTTTCTCTCTATACAGCATTAGGAGGTGTTCGCCCCTCAGCATGCTTACCTATAACCATTGATGTTGGCACAAACAACGAGAAGTTGCTGAATGATGAATTTTACATTGGACTTAGGCACAAGAGAGCAACGGGGAAGGAATATGCGGAGCTTCTGGATGAGTTTATGCATGCAGTTAAACAGAACTATGGTGAGAAAGTCCTGATACAGTTCGAGGATTTTGCAAATCACAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTCTTCAATGATGATATACAGGGTACAGCATCAGTAGTATTGGCAGGGTTGCTTGCTTCCCTGAAATTAGTAGGGGGAAATTTAGCTGATCATACCTTCTTATTCCTTGGTGCTGGAGAGGCTGGAACAGGCATAGCAGAGCTGATAGCTCTTGAGGTTTCTAAGCAGACAAAAGCTCCATTGGAAGAAACCCGCAAGAAAATTTGGCTGGTGGATTCAAAGGGACTGATTGTTAGCTCTCGTATGGAGTCACTTCAGCCCTTCAAAAAGCCTTGGGCTCATGAGCATGAACCTGTGAAGGGACTTCTAGATGCTGTCAAGGCAATCAAGCCAACAGTTCTTATTGGATCATCTGGAGTAGGAAAAACATTTACAAAGGAGGTGGTTGAAGCCATGTCATCCTTAAATGAGAAACCCCTCATTCTTGCTCTTTCAAACCCAACTTCACAATCTGAGTGCACAGCCGAAGAAGCTTATACATGGAGCAAGGGACGAGCAATCTTTGCCAGTGGAAGTCCATTCGATCCAGTTGAATTTGAAGGAAAAGTTCATGTGCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTCGGTTTGGGTTTGATCATCTCCGGTGCCATCCGTGTGCGGGATGAAATGCTCCTAGCGGcctgtaagtatatatatatatatatatatatatatgataatgttGATTTAACAAGCTTATGTTTAGGGAAGAAGCATAAGAATATTTACTTATGTTTTGATGCAGCTGAGGCTTTGGCTGCTCAAGTGACACAGGAAAACTATGATAAGGGACTGATTTACCCGCCTTTCACTAATATAAGAAAGATATCAGCTAACATTGCTGCTAATGTTGCAGCTAAGGCATATGAACTTGGTCTGGCTACAAATCTTCCTCGACCTAAGGATCTCGTCAAATGTGCAGAAAGCTGTATGTACAGCCCAGTCTACCGAAGCTACCTTTGA 1935 0.432 MMMSFKRQRCNFLKQVLNCGEVGRKFVALMSSTLKEMRNGGVSAGVRDLYVEDSSTEDELITPGTFSVASGCTLLRDPRYNKGLAFTEKERDAHYLRGLLPPAILSQELQEKRMMHNLRQYEVPLHRYTALMDLQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLYVSLKDKGKILEVLKNWSEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDEFYIGLRHKRATGKEYAELLDEFMHAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGNLADHTFLFLGAGEAGTGIAELIALEVSKQTKAPLEETRKKIWLVDSKGLIVSSRMESLQPFKKPWAHEHEPVKGLLDAVKAIKPTVLIGSSGVGKTFTKEVVEAMSSLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEFEGKVHVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAACKYIYIYIYIYDNVDLTSLCLGKKHKNIYLCFDAAEALAAQVTQENYDKGLIYPPFTNIRKISANIAANVAAKAYELGLATNLPRPKDLVKCAESCMYSPVYRSYL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0664 644 Pfam Malic enzyme, NAD binding domain 546 612 IPR012302 GO:0051287
Sto5g0664 644 Pfam Malic enzyme, NAD binding domain 326 542 IPR012302 GO:0051287
Sto5g0664 644 ProSitePatterns Malic enzymes signature. 322 338 IPR015884 GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 141 165 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 201 230 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 237 259 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 297 315 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 322 338 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 353 369 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PRINTS Malic enzyme signature 456 472 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 Gene3D - 69 323 IPR037062 GO:0004471
Sto5g0664 644 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 62 325 IPR046346 -
Sto5g0664 644 Gene3D - 324 644 - -
Sto5g0664 644 CDD NAD_bind_1_malic_enz 326 638 - -
Sto5g0664 644 PIRSF ME 545 644 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PIRSF ME 43 546 IPR001891 GO:0004470|GO:0004471
Sto5g0664 644 PANTHER MALIC ENZYME 28 540 - -
Sto5g0664 644 PANTHER MALIC ENZYME 560 643 - -
Sto5g0664 644 SMART Malic_M_2 326 613 IPR012302 GO:0051287
Sto5g0664 644 PANTHER MALIC ENZYME-RELATED 28 540 - -
Sto5g0664 644 PANTHER MALIC ENZYME-RELATED 560 643 - -
Sto5g0664 644 SMART malic_2 135 316 IPR012301 GO:0004471
Sto5g0664 644 Pfam Malic enzyme, N-terminal domain 135 315 IPR012301 GO:0004471
Sto5g0664 644 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 326 641 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0664 Sto-Chr5 4475413 4479707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0664 K00029 - gmx:100801564 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0664 5 4475413 4479707 Sto5g0664 5 4475413 4479707 ECH
Sto8g2048 8 13299991 13304710 Sto5g0664 5 4475413 4479707 ECH
Sto9g0278 9 2606765 2609033 Sto5g0664 5 4475413 4479707 ECH