Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0641 ATGAAGGAGTCTCTCTCGGGGAATTATCCGCTAAACTGGGATGTCAAAGGAGGGAAATCTGTCTGCAACTTCACTGGAGTTAGGTGCAACAGCCAAGGGGACGTCATCAATCTTGACATCTCCGGTTGGTCACTTTCTGGGAAATTCCCCACAGATATATGCTCCTATCTACCAGAGTTACGTTTTCTGCGTCTTGGCTTCAATCGTTTGAGAGGAAATTTTCTTGACACCATAATCAACTGTTCCAACTTGGAAGAGCTTAACATGAATCATGTGTACCATACAGGAACCCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACATATTCACCGGCCACTTCCCCATGTCAGTGTTTAATCTCACCAATATTGAGGTTCTTAACTTCAATGAGAATACAGGCTTCAACTACTGGGAGCTGCCAGAGGATATGTACAGGCTGAAAAATCTCAAGTCTGTGATCTTCATGACATGCATGCTGCGTGGCCGAATCCCTGCATCAATAGGAAACGTTTCATCTCTGGTTGATCTTGAATTGAGTGGAAATTACCTCACGGGCCAAATTCCTGTGGAGCTTGGATTGCTGAAAAACTTGCAGCAGCTTGAGCTTTATTATAACCAACTTGTTGGCAATATACCAAAGGAGCTAGGAAATCTCACAGAGCTCAGAGACTTGGACATGTCAGTGAATAAGTTGGCGGGAAGTCTTCCAGAATCTGTATGTGGACTTCCCAAGCTTGAAACCTTGCAGCTATACAACAATAGCCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTATCTCTTTATGACAATTTCCTGACCGGAGAAGTCCCAAGAAATCTGGGCAAGTTCTCTGGAATGTTAGTTCTAGACTTATCCGAAAACAGATTGTCTGGTCCATTGCCAACAGAGGTTTGTAATGGAGGTAAGCTGCTCTACTTCCTTGTTCTTGATAATATGTTTTCTGGAGAGATACCTGAGAGTTATGCAACGTGCTGGACTCTGTTGAGGTTTCGGGTCAGTAATAACCAGTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGTCTACCACATGTTTCAATAATTGACTTGAGTAACAATAATTTGACTGGTCCAATTTCTGAGACCATTCGAAACCCCAGAAACCTGTCAGAACTATTCATACAAAAGAACAGGATTTCAGGCGTCATACCTCCTACAATCTCTCGAGCTACAAATCTGGTGAAGATTGATTTCAGTAACAACATTCTGTGTGGTCCAATACCTTCTGAAATTGGAAGTCTTAAAAAGCTTAATTTACTGATGTTACAAGGGAATAAGCTGAATTCTTCCATCCCCAGTTCACTTTCCTTATTGAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTCTTGACAGGAAGCATCCCTGAAAGTTTCTCTGATCTTCTACCCAACtctatcaacttttcaaataaCTTGCTTTCTGGTCCAATTCCTCCCTCTTTGATAAAAGGAGGTTTAGTTGAAAGCTTCTCAGGCAACCCAGGTCTGTGTGTGTCACCAGTCTACACTAATTCATCGGATCAAAAATTTCCGATATGTACAAAGACAAGCAGCAAAAAGAGGCTAAACACCTTCTGGGTAGCTGGGATTTCAGCTGTTTTGATCATAACTGGAGCTGCCTTGTTTCTGAAACGTCGGTATAGCAAAGACAGAGCTGCGGTGGAACATGATAAAACACTGTCTTCCTCATTCTTCTCATATGAAGTGAAAAGCTTTCACAGAATAACTATTGATCAACGGGAGATCACTGAGGCCATGGTGGAAAAGAATATAGTGGGGCATGGGGGGTCTGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGAATTTGTTGCAGTGAAGAGGCTCTGGAGTCGAATGTCTAAGGATTCGGCTCCAGAGGATGGGTTAGTTTTGGATAAGACATTGAAAACTGAAGTGGAGACCCTGGGAAATATAAGACACAAGAACATTGTCAAACTGTACTGCTATTTCTCAAGTTTGGACTGCAGCTTGTTAGTTTATGAGTACATGCCTAATGGTAATCTTTGGGATGCTCTGCACAAGAGTTCGATCCATTTGGATTGGCCTACTCGCCACAAGATTGCACTAGGGACTGCACAGGGTCTGGCATACCTCCACCACGATTTGCTTCCTCCTATTATTCATAGAGACATCAAGTCAACTAATATCCTGCTGGATGTTAATTACCAACCCAAGGTTGCAGATTTCGGGATCGCGAAGGTTTTGCAGGCAAGAGGAGGGAAGGATTCAACATCAACTGTTATTGCAGGAACATATGGTTACTTAGCACCAGAATATGCATATTCATCCAGAGCAACTACCAAGTGTGATGTCTACAGTTTTGGGGTGATTTTAATGGAACTTATAACAGGGAAGAAGCCCGTAGAGTCAGAATTTGGAGAGAACAGAAACATCGTATATTGGGTTTCAAACAAAGTGGACAGCAAGGAAGGGGCTAGTGAAGTTTTAGACAAGCGATTAGTAGGGTCATACAAGGAGGAAATGATTCAGTTGCTCCGAATTGCCATACGCTGCACCTACAAGGCTCCAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAGGTGCTGATTAAGGCAGACCCATCTAGTAAGTTGTCCAATAAGACCAAAGAAACGTCAAATTCCACCATGACAAAGAACCCATTTGAATTGTAG 2766 0.4266 MKESLSGNYPLNWDVKGGKSVCNFTGVRCNSQGDVINLDISGWSLSGKFPTDICSYLPELRFLRLGFNRLRGNFLDTIINCSNLEELNMNHVYHTGTLPDFSPMKSLRILDLSYNIFTGHFPMSVFNLTNIEVLNFNENTGFNYWELPEDMYRLKNLKSVIFMTCMLRGRIPASIGNVSSLVDLELSGNYLTGQIPVELGLLKNLQQLELYYNQLVGNIPKELGNLTELRDLDMSVNKLAGSLPESVCGLPKLETLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRNLGKFSGMLVLDLSENRLSGPLPTEVCNGGKLLYFLVLDNMFSGEIPESYATCWTLLRFRVSNNQLVGSIPEGLLGLPHVSIIDLSNNNLTGPISETIRNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNILCGPIPSEIGSLKKLNLLMLQGNKLNSSIPSSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYTNSSDQKFPICTKTSSKKRLNTFWVAGISAVLIITGAALFLKRRYSKDRAAVEHDKTLSSSFFSYEVKSFHRITIDQREITEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWSRMSKDSAPEDGLVLDKTLKTEVETLGNIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKSSIHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTSTVIAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVESEFGENRNIVYWVSNKVDSKEGASEVLDKRLVGSYKEEMIQLLRIAIRCTYKAPALRPTMKEVVQVLIKADPSSKLSNKTKETSNSTMTKNPFEL 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0641 921 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Sto5g0641 921 Gene3D Transferase(Phosphotransferase) domain 1 700 918 - -
Sto5g0641 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Sto5g0641 921 SUPERFAMILY RNI-like 35 312 - -
Sto5g0641 921 SMART LRR_typ_2 298 322 IPR003591 -
Sto5g0641 921 SMART LRR_typ_2 202 226 IPR003591 -
Sto5g0641 921 SMART LRR_typ_2 250 273 IPR003591 -
Sto5g0641 921 SMART LRR_typ_2 466 489 IPR003591 -
Sto5g0641 921 SMART LRR_typ_2 442 465 IPR003591 -
Sto5g0641 921 SMART LRR_typ_2 57 81 IPR003591 -
Sto5g0641 921 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 913 - -
Sto5g0641 921 SMART serkin_6 615 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0641 921 Gene3D Ribonuclease Inhibitor 1 271 IPR032675 -
Sto5g0641 921 SUPERFAMILY Protein kinase-like (PK-like) 601 893 IPR011009 -
Sto5g0641 921 Pfam Protein kinase domain 617 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0641 921 MobiDBLite consensus disorder prediction 901 921 - -
Sto5g0641 921 SUPERFAMILY L domain-like 219 530 - -
Sto5g0641 921 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1 913 - -
Sto5g0641 921 Gene3D Ribonuclease Inhibitor 272 537 IPR032675 -
Sto5g0641 921 Gene3D Phosphorylase Kinase; domain 1 597 699 - -
Sto5g0641 921 ProSiteProfiles Protein kinase domain profile. 615 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0641 921 PRINTS Leucine-rich repeat signature 301 314 - -
Sto5g0641 921 PRINTS Leucine-rich repeat signature 466 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0641 Sto-Chr5 4310564 4313672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0641 1 909 Receptor kinase-like Gene Family AT5G49660 67.065 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto5g0641 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0641 - - lja:Lj1g3v2096140.1 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0641 5 4310564 4313672 Sto5g0641 5 4310564 4313672 ECH