Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0640 ATGTTTGCCGCCATCACTTCCCCGCGTGTCCCTTCTCttctctatctctatctctatctCCTCTGTTTCATCTCAGTCCTCGTCGGAGTCAAATCCGATGAACAAGAACGTCAACTTCTGCTAAACCTCAAATCTTCACTTCACAACTCCAACCCCACCCTATTCCATTCATGGAACTCTTCCAATTCCGTCTGCAGTTTCTACGGAGTCACCTGCAATCCACACGCTTCCGTCGCTGAGATCGATCTCTCCCATCACAACCTCTCTGGGCTTCTCCCTTTTGACTCCATTTGCCAACTCCAATCACTCCACAAGCTCGCTTTCGGCTTCAATTCATTCTACGGAAACGTCTCACACCATTTGAAAAGCTGTGCTAACTTGCGGTATTTGGACTTGGGGAATAACATCTTCTCAGGGCCATTCCCTGACATATCTCCTCTCAATCAATTGCAGTATTTGTATTTGAATCTAAGTGGGTTTTCTGGAACCTTCCCATGGAAGTCGCTTCGAAACCTGACGAATCTCGTGGTGTTAAGCGTTGGAGATAACCCTTTCGACCCAACTCCTTTTCCTACTGAAGTCGTCAGCCTCAAGAAGCTGAATTGGCTTTACATGTCGAATTGCAGTCTTAATGGGATAATCCCACCAGGGGAAATTCCCTCGGAGATCGGGAAGCTCACGAAGCTATGGCAGCTTGAGATGTACAACAATTATTTCACCGGCAAGCTTCCATTTGGGTTGAGAAACCTCACGGGGCTACAATTCTTCGATGGCTCCATGAATAATTTCGTAGGCGACCTCTCTGAAGTGAGGTTCTTGAGTAATTTAGTTTCTCTCCAACTATTCGAAAACAAGCTTTCAGGGGAGATTCCGATGGAGATTGGCGAATTCAAGCATCTCGTGAACCTCTCGTTGTACAGAAACCAATTGACTGGTCCTATTCCTCAAAAGGTTGGATCTTGGGCGGATTTCGATTTCATCGACGTGTCGGAGAATCTCCTGACGGGTCCTATTCCTCCAGATATGTGCAATAAGGGGACGATGCACGGACTGTTCGTGCTCCAGAACAAGCTCACCGGAGAGATTCCTGCCACGTATGCAAAGTGTACGTCTCTGCGTCGATTCAGAGTGAGCAACAACTCTCTCTCCGGTTCCGTCCCTGCGGGGATTTGGGGATTACCAAACGTCGTGATTATCGACATCGAACTGAATCAGTTAGACGGTTACATCACTTCCGATATCGAAAACGCCAAGACTCTGGCTCAGATATACGCCAGAAAGAACCTCTTATCGGGCGAAATCCCGGAAGAGATTTCGAAAGCGACGTCGTTAATTGCAATTGACTTGAGCGAGAATCAAATTTCGGGGAAGATTCCAGAAAGAATCGGCGAGCTTAAACAATTAAGCAGTCTTGATTTACAGAGCAATAAGCTATCAGGTTCGATTCCGGACTCGCTTGGTTCGTGTGCATCTCTCAGTGAAATCCAACTCTCTCAGAATTCTCTCTCTGGAGAAATGCCTTCGTCTCTCGGTTCCTTACCCGTTCTCAATTCTCTAAACTTGTCCAAGAACGAActctccggcgagattccggcgagtTTCTCACGGCTCCGGTTGAGCCTATTTGATCTATCGGATAACAAATTGACGGGCGCGATTCCTCAAGCTCTGTCTATTCAAGCTTATAATGGAAGCCTGGACGGAAATCCAGGACTGTGTAGTTCTGACGTAGGCATTACGTCATTCAAGCGTTGCTCTGGAAGTTCCGAAATGCCTAGAGACATCCGTACACTCATAATTTGCTTCTCCATCGGCTCTATCGTGCTCCTGCTCTGTCTCGCGCTTTACAAGCAgcggaagaagaaggagaaagatCGAGAACGTTCTCTAAAGGAGGAATATTCGTGGGACGTCAAGTCCTTCCACGTGCTGAGTTTCACGGAGGACGAGATTCTAGATTCCATCAAGCAGGAGAATCTCATCGGAAAAGGAGGATCCGGGAACGTGTACAGAGTGACGCTCTCCAACGGGAAAGACCTCGCCGTGAAGCACATCTGGAATAACAACGTGGACGGCGGCGGCGggcggaggaggaggaggccGATGATGGGAAAATCGAAGGAATTTGAGGCGGAGGTGGAGGCGTTGAGCTCGATAAGGCACGTGAATGTGGTGAAGCTGTATTGCAGCATAACGAGCGAGGAATCGAGCTTGTTGGTGTATGAGTATATGCCAAATGGGAGCTTGTGGGATAGGCTTCACGTTGATCGCATGAAGAATGAGCTTGATTGGGAGACGAGGTACGAGATTGCGGTGGGTGCGGCGAAGGGGTTGGAGTATCTGCATCATGGGATTGCTGATTTCGGATTGGCTAAGATTGTTGAGGCCAACGTTGTAGCAGGATGCGTGGATAATTCCACTCAAGTTGTGGCTGGAACTCACGGCTACATTGCTCCTGAATATGGGTACACATACAAAGTGAATGAGAAGAGCGATGTGTATAGCTTTGGGGTGGTGTTAATGGAGTTGGTGACGGGGAAGAGGCCAACGGAAGCAGAGTTTGGAGAGAAGGAAGACATAGTGAACTGGGTGTGCAGCAAAGTGCAGGAGCATAATAAAGAGAGGATGATGGAAGTAGTGGATTCCAGAATCCCCAAACACTACAAAGAGGAGGCTATCAAGGTCTTGAGGATTGCTATTCTCTGTACTGCCACGCTTCCTGCACTCAGGCCCACCATGAGAAGTGTGGTTCAGATGTTGGAGGATGCTGACCCTTGTAAATTGCTCGGAATCCTCGTTACCAAAGACCACTCCGCCAACAAAATGCAAACTCACAAACCAACATAA 2847 0.4651 MFAAITSPRVPSLLYLYLYLLCFISVLVGVKSDEQERQLLLNLKSSLHNSNPTLFHSWNSSNSVCSFYGVTCNPHASVAEIDLSHHNLSGLLPFDSICQLQSLHKLAFGFNSFYGNVSHHLKSCANLRYLDLGNNIFSGPFPDISPLNQLQYLYLNLSGFSGTFPWKSLRNLTNLVVLSVGDNPFDPTPFPTEVVSLKKLNWLYMSNCSLNGIIPPGEIPSEIGKLTKLWQLEMYNNYFTGKLPFGLRNLTGLQFFDGSMNNFVGDLSEVRFLSNLVSLQLFENKLSGEIPMEIGEFKHLVNLSLYRNQLTGPIPQKVGSWADFDFIDVSENLLTGPIPPDMCNKGTMHGLFVLQNKLTGEIPATYAKCTSLRRFRVSNNSLSGSVPAGIWGLPNVVIIDIELNQLDGYITSDIENAKTLAQIYARKNLLSGEIPEEISKATSLIAIDLSENQISGKIPERIGELKQLSSLDLQSNKLSGSIPDSLGSCASLSEIQLSQNSLSGEMPSSLGSLPVLNSLNLSKNELSGEIPASFSRLRLSLFDLSDNKLTGAIPQALSIQAYNGSLDGNPGLCSSDVGITSFKRCSGSSEMPRDIRTLIICFSIGSIVLLLCLALYKQRKKKEKDRERSLKEEYSWDVKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVTLSNGKDLAVKHIWNNNVDGGGGRRRRRPMMGKSKEFEAEVEALSSIRHVNVVKLYCSITSEESSLLVYEYMPNGSLWDRLHVDRMKNELDWETRYEIAVGAAKGLEYLHHGIADFGLAKIVEANVVAGCVDNSTQVVAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPTEAEFGEKEDIVNWVCSKVQEHNKERMMEVVDSRIPKHYKEEAIKVLRIAILCTATLPALRPTMRSVVQMLEDADPCKLLGILVTKDHSANKMQTHKPT 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0640 948 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Sto5g0640 948 SUPERFAMILY Protein kinase-like (PK-like) 643 921 IPR011009 -
Sto5g0640 948 Pfam Protein kinase domain 657 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0640 948 Pfam Protein kinase domain 785 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0640 948 Gene3D Transferase(Phosphotransferase) domain 1 641 784 - -
Sto5g0640 948 SUPERFAMILY L domain-like 193 560 - -
Sto5g0640 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 785 933 - -
Sto5g0640 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 785 - -
Sto5g0640 948 Gene3D Ribonuclease Inhibitor 270 344 IPR032675 -
Sto5g0640 948 ProSiteProfiles Protein kinase domain profile. 655 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0640 948 Coils Coil 613 633 - -
Sto5g0640 948 SUPERFAMILY L domain-like 65 267 - -
Sto5g0640 948 Gene3D Ribonuclease Inhibitor 189 269 IPR032675 -
Sto5g0640 948 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Sto5g0640 948 Pfam Leucine Rich Repeat 126 142 IPR001611 GO:0005515
Sto5g0640 948 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 785 933 - -
Sto5g0640 948 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 17 785 - -
Sto5g0640 948 Gene3D Ribonuclease Inhibitor 32 188 IPR032675 -
Sto5g0640 948 Gene3D Transferase(Phosphotransferase) domain 1 785 923 - -
Sto5g0640 948 Gene3D Ribonuclease Inhibitor 346 592 IPR032675 -
Sto5g0640 948 Pfam Leucine rich repeat 491 549 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0640 Sto-Chr5 4300783 4303833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0640 7 936 Receptor kinase-like Gene Family AT1G09970 58.206 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto5g0640 Pkinase 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0640 - - gmx:100779554 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0640 5 4300783 4303833 Sto5g0640 5 4300783 4303833 ECH