Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0629 ATGGAAAGCAGTAGACCCGATTTGCTTGATGCTGCACTTTTGAGACCAGGCAGGTTAGATCGACTTCTGTTCTGTGACTTTCCATCGTGGCATGAAAGGCTTGAAATTGTCACAGTACTTTCTAGAAAGTTGCTCCAAGCTCTCCTTTCCGATGCTCAACTTGGAGCAGTTCATGAAGTTCTGGATAACGTAGACACCCATTGGCAAGAGAAAACACCACTTATTACGGATGCTCTTCTCAAGTTTACTGCCTCCGTGAATGTTCCTCTTCCGGTATTTGGAAAGACTCTTTGCTATGCTAATGCCTTTTCTGATGTGGATGACATTATTGTTGCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGACCATCAGgtga 387 0.4419 MESSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIVTVLSRKLLQALLSDAQLGAVHEVLDNVDTHWQEKTPLITDALLKFTASVNVPLPVFGKTLCYANAFSDVDDIIVAVKRCKRQEGNSSVTIR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0629 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 67 IPR027417 -
Sto5g0629 128 Gene3D - 3 27 IPR027417 -
Sto5g0629 128 Gene3D - 28 63 - -
Sto5g0629 128 PANTHER PEROXISOME BIOGENESIS FACTOR 1 3 67 IPR025653 GO:0005524|GO:0005778|GO:0006625|GO:0016887
Sto5g0629 128 PANTHER AAA-FAMILY ATPASE 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0629 Sto-Chr5 4161297 4163245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0629 3 44 Calmodulin-binding Proteins AT3G56690 47.619 9.67e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0629 K13338 - gmx:100803882 126.331