Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0628 ATGGTGTATGAAGCCAACGCGCGAGTGCAAGACCCAGTGTATGGGTGCGTTGGTGCCATCTCTTCTCTTCAGCACCAACTTGATGGGCTTCGGGCCCAACTGGCTCAGGCCCAGGCCGAGTGGATACTTGATAGTGATGATGTGACTTATCCTGCGGCAACAATACATATGAAGGCAGGTTCTATTGCCATTTCAACTGTTTTGATAATGGATGTTGTTTCTCAGTGA 228 0.4912 MVYEANARVQDPVYGCVGAISSLQHQLDGLRAQLAQAQAEWILDSDDVTYPAATIHMKAGSIAISTVLIMDVVSQ 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0628 75 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 42 - -
Sto5g0628 75 Coils Coil 20 40 - -
Sto5g0628 75 Pfam Lateral organ boundaries (LOB) domain 1 38 IPR004883 -
Sto5g0628 75 ProSiteProfiles LOB domain profile. 1 41 IPR004883 -
Sto5g0628 75 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0628 Sto-Chr5 4157986 4158838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0628 1 42 AS2 family AT1G16530 76.190 8.15e-17 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto5g0628 LOB 2.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0628 - - egt:105950157 73.9442