Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0624 ATGAAAGGGAGTAGTGGTAGTGGAAAGAAGCAGACTGGTTCGTCGCCTTGTGCTGCGTGTAAGCTTCTTCGAAGAAGGTGTGATAAACAATGTGTGTTCGCTCCATATTTCCCAGCCCATCACCCTCACAAGTTCATTAATGTCCACAAAGTGTACGATGCCAGTAACGTCTACAAGATGCTTCAGTGGATACTGGATAGTGATGATGTGACTTATCCTGCGGCAACAATACATATGAAGGCAGGTTCTATTGCCATTTCAACTGTTTTGATAATGGATGTTGTTTCTCAGTGA 294 0.4354 MKGSSGSGKKQTGSSPCAACKLLRRRCDKQCVFAPYFPAHHPHKFINVHKVYDASNVYKMLQWILDSDDVTYPAATIHMKAGSIAISTVLIMDVVSQ 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0624 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 8 65 - -
Sto5g0624 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 65 - -
Sto5g0624 97 Pfam Lateral organ boundaries (LOB) domain 16 81 IPR004883 -
Sto5g0624 97 ProSiteProfiles LOB domain profile. 15 97 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0624 Sto-Chr5 4142670 4144091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0624 7 64 AS2 family AT1G31320 67.241 7.20e-25 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto5g0624 LOB 4.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0624 - - han:110890119 97.0561