Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0610 atggtGGTGAGGAAAGTAGGCAAGTATGAGATTGGGAGGACGATTGGGGAGGGTACTTTTGCAAAAGTGAAGTTCGCACAGAACACAGAGACCGGTGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGTACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTCAGACATCCATATGTTGTTCGTCTGCATGAGGCATGTGATCTTTTCTGGACCTTAGACCTgtctcctttatttttttttcctttttcttttttaagATATGAAagatttgaaaatgaaaataaaatttgtgtgCAGGTGCACCATGGGCGTATAAGTGAATCTGAATCAAGAAGATACTTCCAACAGCTTATAGATGGTGTGGATTTTTGCCACAGCAAAGGAGTTTATCACAGAGATTTAAAGCCTGAAAACCTTTTACTCGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTAAGTGCATTTCCAGAACAGGGGGTTAGTATCCTTCGGACGACTTGTGGGACTCCAAACTATGTAGCTCCTGAGGTACTCAATCATAAGGGTTATGATGGTGCTCTGGCAGATGTTTGGTCGTGTGGGGTTATCCTTTATGTTCTCTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTCACCACGTTATACAGTTGCATGTTAATCTATTTGCTTTCTCAAAACAGTGTTGTGAATGGCACAGAATTTGGGTCTGGACTGGGAACAAGAAAAATTCATAGAGCAGATTTTTCATGCCCTCCTTGGTTTCCCGTGGGAGCAAAGTCTTTAATACAAAGAATTCTGGATCCAAATCCTGCTACTTCTCCTTCCCACCATTCTTTCTGTGTGCATGCACATACACAGCGCATAACTATTGAACAGATGAGAAGTGATGAGTGGTTCAAGAAGGAATATGTTCCTGTCAGTCTAGTTGAGCATGAAGATGTAAATTTGGATGATGTAAATGCAGCTTTTGACGATGCTGAGGATCAAGCAGATAATCAACATAGTGAGAATGAAGACATGGGTCCTTTAATGCTCAATGCATTTGACTTGATAATTCTATCTCAAGGCTTAAACCTAGCAACACTCTTCGATCGTGGAAAGGATTCTATGAATTACCAAACGCGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAGGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGTAACTATAAGATGAGAGTAGAAGGTACTTCAGCTGATAAGACTTATTATTTCTCGGTGATGGTGGAAATTTTTGAAGTTGCTCCCACATTTTTTATGGTGGACATTCAAAAAGCAGCTGGAGATGTAGGTGAATACCTCAAGCATGTATTTGCAGAACCAGTTATAAGCAGAGAGGAGAAGACAGAAAGAGAAAGATTACCCATGCGAATGCCCCCAGGAACCATGGCAGACACATCCCCTGGAACGAACTTGTTGCTAACTTGCCATGATTGCCAACTCTCAAGAATAGGTGCAATGACAACAATTGATAATGAAAGGGATCCAGACAATGACTGCACATTGACTGTCAAAAGTAAAGCATGTGATCAAACTACTGTTCTAATCTGa 1635 0.3963 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEACDLFWTLDLSPLFFFPFSFLRYERFENENKICVQVHHGRISESESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSAFPEQGVSILRTTCGTPNYVAPEVLNHKGYDGALADVWSCGVILYVLLAGYLPFDELDLTTLYSCMLIYLLSQNSVVNGTEFGSGLGTRKIHRADFSCPPWFPVGAKSLIQRILDPNPATSPSHHSFCVHAHTQRITIEQMRSDEWFKKEYVPVSLVEHEDVNLDDVNAAFDDAEDQADNQHSENEDMGPLMLNAFDLIILSQGLNLATLFDRGKDSMNYQTRFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGTSADKTYYFSVMVEIFEVAPTFFMVDIQKAAGDVGEYLKHVFAEPVISREEKTERERLPMRMPPGTMADTSPGTNLLLTCHDCQLSRIGAMTTIDNERDPDNDCTLTVKSKACDQTTVLI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0610 544 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Sto5g0610 544 Coils Coil 329 349 - -
Sto5g0610 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Sto5g0610 544 Pfam NAF domain 355 413 IPR004041 GO:0007165
Sto5g0610 544 Pfam Protein kinase domain 9 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0610 544 SMART serkin_6 9 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0610 544 SUPERFAMILY Protein kinase-like (PK-like) 6 313 IPR011009 -
Sto5g0610 544 PANTHER - 254 465 - -
Sto5g0610 544 PANTHER - 2 230 - -
Sto5g0610 544 Gene3D Phosphorylase Kinase; domain 1 2 79 - -
Sto5g0610 544 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 230 - -
Sto5g0610 544 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 254 465 - -
Sto5g0610 544 ProSiteProfiles Protein kinase domain profile. 9 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0610 544 Gene3D Transferase(Phosphotransferase) domain 1 106 320 - -
Sto5g0610 544 CDD CIPK_C 359 464 - -
Sto5g0610 544 MobiDBLite consensus disorder prediction 476 495 - -
Sto5g0610 544 Gene3D Kinase associated domain 1, KA1 352 472 - -
Sto5g0610 544 ProSiteProfiles NAF domain profile. 353 377 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0610 Sto-Chr5 4011547 4020604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0610 1 438 CBL-interacting serine-threonine protein kinases AT4G24400 68.037 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto5g0610 Pkinase 3.3e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0610 - - gmx:100785444 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0610 5 4011547 4020604 Sto5g0610 5 4011547 4020604 ECH