Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0608 ATGAAATCAGTAATTGAACGGTACAAGAAGACGAAAGACGAACATCGACTTGAAAGTTCAACCTCTGAAATAAAGTTCTGGCAAAGAGAGGCAGCAATGTTAAGGCAACAATTGCAGAACTTGCAAGAAAATCACCGGCAAATGATGGGAGAGGAACTTTCAGGTTTGACTGTCAAAGAATTACAGAGTTTGGAAAGCCAATTGGAAATTAGCCTACGAGATGTTCGTTTGAAAAAGGATCAAATTTTAATGGATGAAATCCAGGAACTAAACCAAAAGGGAAACCTTCTACACCAAGAAAATATGGAACTATGTAAGAAAGTAAACCTAATTCATCAAgaaaacatggaattaaaaaAGAAGGTCTACGGAACAAAAGAGGGAAATGGAACAAACAGAAATTCGATTCTCACCAATGGTTTAGGCATAGAAGAGGATTTGCATGTGCCTGTGAATCTCCAGCTTAGCCAGCCTCACCAACAAAACTATGACACATCTTCAGGAGCCACAGAGTTGGGATTGTTTGTGATTGCTACAGCAGATTGCAACTGCATTGATGCATCTCCAGGGGATTTATGTGTCTTCATTGCTATCAATGAAGATGGGCTCAGATTTGGATCGTAA 624 0.3846 MKSVIERYKKTKDEHRLESSTSEIKFWQREAAMLRQQLQNLQENHRQMMGEELSGLTVKELQSLESQLEISLRDVRLKKDQILMDEIQELNQKGNLLHQENMELCKKVNLIHQENMELKKKVYGTKEGNGTNRNSILTNGLGIEEDLHVPVNLQLSQPHQQNYDTSSGATELGLFVIATADCNCIDASPGDLCVFIAINEDGLRFGS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0608 207 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 170 - -
Sto5g0608 207 ProSiteProfiles K-box domain profile. 24 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto5g0608 207 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 170 - -
Sto5g0608 207 Coils Coil 17 51 - -
Sto5g0608 207 Pfam K-box region 20 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0608 Sto-Chr5 3993695 3996947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0608 1 175 MADS-box Gene Family AT3G57230 59.659 7.14e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0608 K09264 - tcc:18591843 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0608 5 3993695 3996947 Sto5g0608 5 3993695 3996947 ECH