Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0583 ATGGTGGAGAATGACAACAAGAAGAAGGTCACATTTAGCGATGAAGACGCTGCTGAGCTCTCAGAGAAGTACGATGCAGTCACAATTTTAACATTGGTCCAGGAAATCTCGCGACATGCTGATGTCAAGATTGATTGGAATGAAGTGGTAAAAAATACAGCTACTGGGATTTCTAATGCTAGAGAATATCAAATGATTTGGCGTCATATTGCGTACGGTCATGAATTGCTTGACCATGTAGAAGACGGGGCTGAACCTCTGGATGATGATAGTGATTTGGACTGTGAACTGGAAGCAGAACCCCCAGTAAACAACGAGAATGCATTAGAGACTTCAGCATGTGTGAAGGTGATGCTGGATTCTGCTATGCTAAGTGAAGCCGGTCCTAGTAGCTCGACAATTGAAGCTCCGATTTCTATAAGTCTCCCAGTTCGTGGTTTAAATACACCTGACGGAAGTACGGACCCCTCTAATTCAATGCAAGAAGTAACTATTGTTTTCCCTGTTACTGTTCCTAGACAGCCCCTGCCAACTGTATCTTCAACAGAAGGTGTAGAAGCCAAGGGAATATCTAATGCCAAATctttgaaaaggaaaagaaaagcatGGTCAGAAGAAGAGGACACACAACTACGAGCTGCTGTTCAGAAATGTGGTGAGGGGAATTGGGCAACCATGTCTAAAGGAGGCGACTTTCCTATCAACAGAAGTCCTACACAGTTGGCTCAGGATGGTAATGGAAattataagaaagaaaagagaagtcaGCAACGGCCCTGTTCTGGCGATTGTTATCTGGTTGAGCTCTTGAGATTTCCATTTAACagGATGTCTTGGTATTACCATTTTTCCTGGGTTCGTGTCCTGGCATCAGAGTTTTTTCATGTCCATAACACTGAAGTTCGTTCGAAAAGCATTTTTAAGCCACCAAAGCAAGGAAAAATAACCCCTGTTGAGAGGTGGAGCGTTTTACGAAAGAAAGATGGCACTACGAATTCAGGAACAAACTTGACCAGCTCGCAGTTTACTGCTGAACAGCTGGCAACTCGTCATTCATTATCTTTAGCCCTTGATAtgccattaaaaaaattaactgctCCTGGATCGACTGACCCTGCCAAGACGTCCTTAAACACATCAGCTAAAAACCCTGTGCAGCTAAGTAATACTGCTGAAGCTTCAAAAGTTCACAGCAGTTCCATACAATCTCAGTATGCATCACAGCAATCTACAAAATCTGTGGTCCCTGAAAAGACAATGCTGAAGTCTACTCCAAGTTCAGATGCTGCTGTAAGAGCTACGGCTGTTGCTGTTGGTGCACGTATTGTATCATTGCCAAAGGCAACTCAGGAAAGAAGTGCTGTAAAAATTATGCCTGCAGGTAATTCTTCAATGAAGCTGCCAATGTCTGCTGGTTCACTCACTCACCTAAAAGCTCCTTCAAATGTTTGCACTGGTGTGTCTGCTACAGCTGTTGCGGCGGTTACTCCATCCCGCACTAGTATTGTAAAAGCCGTGTCTTCAACAGTTGAAAATACTCCTACTTGCTCTACTGCCAGCGAACCTTTGAAGCAAGTGAATCCCACACAGGAATTGAGAGTTTCTGATCCTAGTGTTGCACCAGTCCAAGGTGGTGAGAATGAGACTCCAGTTATTGAAAGTATTTTATTAAGAGAGGAACATTTAGAAGACAACTCCGTTTCACATAATCCGGGAGAATCTGACAATAAGGGAGTTGTTACGAATGCAAATACAAAGTTGAATATGGATACTCCTGTTGATGGCAATCTTAATCAGACCATAAAGTCAGTTGACGATGCAATTCTTCTATTGTCTTATCCACTTCCTCCTTCAGCCTCTTCACAAGACTCAGGCCAGCTTGCAGTTCACTCGCTATCTTGTGGTTCTCTTGCTTCATATTCAGAATCTCACCTTGAAATTTTGCAGCCTGATATCCACTTAGCTCAGAATCTGCAATTGCGGCTCTTGATATTTCTTCTTGGATGTTGCACATGGATGAATACCTACCGTGCAGTTCGTCCTGCAATACCGAGTTATGTTCAAGCCACAGCGATAGCTCCGTTCTTATCTCTCTCATGTCCTGGATTGCGTTTTGGAACTTCTGAATCTGATGAACTGAGGTTTTCACTCAAACTGGTCTTAAGTTCGTTTCTTGCGTCCCCACTTGAATTTGCAGCATCATCTTCCTTCTCCTCACTTGTTTCCTTAGCATCAGCAGATTTCATCTTCTTGTACAGTACTAAGTTCTCTGTCTCCTCATCTAGCTTCGCATTTTGCAATTTTCCAGATAGATGCTCAAGGTTACAACTAGCTTCGCCTCTTTACCAAACCAGTCTGAGAAGACACTGCAGTTTCCAGGCTAACAACCTTATTCACAAGTTCATCAATTCTATCTGCCATTTCGGTCACAGTGAAAGACTTACTAGAATCTTCCTCAAGTTGTTCCTTAATCTTCTCTCTCAGTTGATCCACATCTTGTGCCTCTTGTTCCAAGCTAGCCTTCTCTTCTTCTATGTTCCTTAG 2544 0.4206 MVENDNKKKVTFSDEDAAELSEKYDAVTILTLVQEISRHADVKIDWNEVVKNTATGISNAREYQMIWRHIAYGHELLDHVEDGAEPLDDDSDLDCELEAEPPVNNENALETSACVKVMLDSAMLSEAGPSSSTIEAPISISLPVRGLNTPDGSTDPSNSMQEVTIVFPVTVPRQPLPTVSSTEGVEAKGISNAKSLKRKRKAWSEEEDTQLRAAVQKCGEGNWATMSKGGDFPINRSPTQLAQDGNGNYKKEKRSQQRPCSGDCYLVELLRFPFNRMSWYYHFSWVRVLASEFFHVHNTEVRSKSIFKPPKQGKITPVERWSVLRKKDGTTNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTAPGSTDPAKTSLNTSAKNPVQLSNTAEASKVHSSSIQSQYASQQSTKSVVPEKTMLKSTPSSDAAVRATAVAVGARIVSLPKATQERSAVKIMPAGNSSMKLPMSAGSLTHLKAPSNVCTGVSATAVAAVTPSRTSIVKAVSSTVENTPTCSTASEPLKQVNPTQELRVSDPSVAPVQGGENETPVIESILLREEHLEDNSVSHNPGESDNKGVVTNANTKLNMDTPVDGNLNQTIKSVDDAILLLSYPLPPSASSQDSGQLAVHSLSCGSLASYSESHLEILQPDIHLAQNLQLRLLIFLLGCCTWMNTYRAVRPAIPSYVQATAIAPFLSLSCPGLRFGTSESDELRFSLKLVLSSFLASPLEFAASSSFSSLVSLASADFIFLYSTKFSVSSSSFAFCNFPDRCSRLQLASPLYQTSLRRHCSFQANNLIHKFINSICHFGHSERLTRIFLKLFLNLLSQLIHILCLLFQASLLFFYVP 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0583 847 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 584 - -
Sto5g0583 847 MobiDBLite consensus disorder prediction 369 427 - -
Sto5g0583 847 Pfam Myb-like DNA-binding domain 200 241 IPR001005 -
Sto5g0583 847 MobiDBLite consensus disorder prediction 366 427 - -
Sto5g0583 847 SMART sant 199 251 IPR001005 -
Sto5g0583 847 ProSiteProfiles Myb-like domain profile. 195 240 IPR001005 -
Sto5g0583 847 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 584 - -
Sto5g0583 847 MobiDBLite consensus disorder prediction 226 256 - -
Sto5g0583 847 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 224 IPR017930 -
Sto5g0583 847 MobiDBLite consensus disorder prediction 232 246 - -
Sto5g0583 847 CDD SANT_TRF 201 241 - -
Sto5g0583 847 Gene3D - 191 253 - -
Sto5g0583 847 SUPERFAMILY Homeodomain-like 197 242 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto5g0583 Myb_DNA-binding 4.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0583 - - gmx:100805773 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0583 5 3754355 3766123 Sto5g0583 5 3754355 3766123 ECH