Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0572 ATGAAGGACATCATTGCACGGTATAATCTGCATGCCCGCGACATCAGCAAACTGAACAAACCTTCTCTAGAACTGCAGCTAGAGAACACTAATAACACCAAATTGAGTAAAGACGTTGCTGAAAAAACGCACCAGCTAAGGAGGATGAAAGGTGAGGATCTTGACGGACTAAAAATAGAAGAGTTGGTGCAACTGGAGAAAATGCTTGAAACAGGACTTAGCCGCGTAATTGAGACAAAGGAAAATCGGATTATGAGTGAGATTACTGCACTACAGAAAAAGGGAACGGAGTTGATAGAAGAGAACAAGAAGCTGAAGCACAAGATGGATATGCTATGTAGAGGAAAAATAGGAATGCAGGTGGTGGATACTTCAGAAATTGGAATGCAAGAAGAAGGAGTTTCCTCAGAATTATCTATGACCACTAACGTTTGCAGCTGCAACAGTGGCCCTCCTCTTGATGATGATTCTTCTGACACTTCTCTCAAGTTAGGGTAA 498 0.4197 MKDIIARYNLHARDISKLNKPSLELQLENTNNTKLSKDVAEKTHQLRRMKGEDLDGLKIEELVQLEKMLETGLSRVIETKENRIMSEITALQKKGTELIEENKKLKHKMDMLCRGKIGMQVVDTSEIGMQEEGVSSELSMTTNVCSCNSGPPLDDDSSDTSLKLG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0572 165 Coils Coil 88 108 - -
Sto5g0572 165 MobiDBLite consensus disorder prediction 145 165 - -
Sto5g0572 165 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto5g0572 165 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 164 - -
Sto5g0572 165 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 1 164 - -
Sto5g0572 165 Pfam K-box region 30 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0572 Sto-Chr5 3682420 3684268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0572 1 165 MADS-box Gene Family AT2G22540 48.588 1.19e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0572 - - rcu:8268411 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0572 5 3682420 3684268 Sto5g0572 5 3682420 3684268 ECH