Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0571 ATGGAGAAATCAGAAGAAGCCGAACGCTTGCTTGGTGTGGCCGAGAAGCTCTTGTTCAACCGCGATCTCACCGGTTCAAGAGAATTTGCTATTTTGGCTCAGGAAACAGAACCCCTTCTCGAGGGTTCCGATCTGATCTTGGCCATCGTCGAAGTCCTTCTGGCCGCCGATAACCGCATAAACAACCACCTCGACTGGTACGCTATTCTTCAGATCGATCGCCGATCTGACGACTTCGAATTCATCAGGAAGCAATACCGTAGGCTGGCTCTCCTCCTCCACCCTGACAAGAACGGATTCCCCCTCGCCGATCAAGCTTTCAAGCTCGTGAGCGACGCATGGGCTGTTCTATCGGATCCAGCTAAAAAGTCGCTCTACGACAGGGAACTCAGCTTATACTCTAAGGTTGATTTGAGTACGCCCGGTTGGGTTCAGCAGGACAAATTGCCGGTTCGCAGGGGCGATCCCGGCTCGAGTGGTCGGAATCAGGGTTTTGATTTCAGGAATAGCACTGGCAACGCCACTAGGGACGACGAGATTTCACGGCGGAGGCCGTCCACCTTCTGGACGGCGTGCCCCTACTGTTACTTGCTCTGCGAGTACCACAAGATTTACGAGGGATGCTGTTTAATGTGCCAGAATTGTGAGCGATCATTCCATGGGGTTTCGATTCCGACTTTGCCTCCACTTGTGCCGGGCCAGGATGCCTATTATTGCTGCTGGGGCTTCTTCCCATTGAGTTTTGCATCTGCTAATGCCGGCCAGAAGGAGGCGCCGCCGCCACCTCCGGGGTTCTCAAATTGGACGCCGCCTCCGGTGTCTGAATCTGCCCAGCTGCCAGAGAATAATGGTTGGGATAATGCCGTACCCATGGCTGCTGCAAATCCGGTGGCGGCCGCGAAGCCGGTTAAGGTTTCGAATGGGATTTCTTCGGGTTTTGGATCTAGTGGGCGGAAGCGAGGAAGGCCCCGGAAGAATCCTTTACTAATGTGGAGGTTCAATGGGAAGAGAGGTTTCATAATTTTGGAGGTTGATGTGGTAACAGCTGGTAGAAAGCTGAAGCTGCTTGGCCTGAAAACTCATAGGTCCTCAAAGACCCTAAGCAACCCAGCTGCCAAATCACCATag 1128 0.5319 MEKSEEAERLLGVAEKLLFNRDLTGSREFAILAQETEPLLEGSDLILAIVEVLLAADNRINNHLDWYAILQIDRRSDDFEFIRKQYRRLALLLHPDKNGFPLADQAFKLVSDAWAVLSDPAKKSLYDRELSLYSKVDLSTPGWVQQDKLPVRRGDPGSSGRNQGFDFRNSTGNATRDDEISRRRPSTFWTACPYCYLLCEYHKIYEGCCLMCQNCERSFHGVSIPTLPPLVPGQDAYYCCWGFFPLSFASANAGQKEAPPPPPGFSNWTPPPVSESAQLPENNGWDNAVPMAAANPVAAAKPVKVSNGISSGFGSSGRKRGRPRKNPLLMWRFNGKRGFIILEVDVVTAGRKLKLLGLKTHRSSKTLSNPAAKSP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0571 375 Gene3D DnaJ domain 54 140 IPR036869 -
Sto5g0571 375 SMART dnaj_3 64 122 IPR001623 -
Sto5g0571 375 SUPERFAMILY Chaperone J-domain 56 131 IPR036869 -
Sto5g0571 375 PRINTS DnaJ domain signature 67 85 IPR001623 -
Sto5g0571 375 PRINTS DnaJ domain signature 86 101 IPR001623 -
Sto5g0571 375 PRINTS DnaJ domain signature 102 122 IPR001623 -
Sto5g0571 375 Pfam DnaJ domain 65 127 IPR001623 -
Sto5g0571 375 CDD DnaJ 65 119 IPR001623 -
Sto5g0571 375 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Sto5g0571 375 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 325 - -
Sto5g0571 375 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 325 - -
Sto5g0571 375 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0571 Sto-Chr5 3654839 3656748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0571 6 328 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.968 2.03e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0571 - - gmx:100816918 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0571 5 3654839 3656748 Sto5g0571 5 3654839 3656748 ECH