Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0567 ATGAAAGGTGAATATGTAGAGCAACAGGGGAAGGCTGGAACCCCCAATATGTTCTCGAAgcttcacCTCTCTCGCGAATCCCAAACCTCCGAAGAAGATGACAGCAGTGGGCCTACTCCCAACCCAGCCCACAAGCCCATGTCCACCGAGCCCACCTCCGCCGCTGACGGCGCCAGCATTGAGGTCGTCAGGCGGCCTAGGGGACGCCCGCCTGGGTCCAAGAACAAGCCCAAGCCTCCCGTTATCATTACCCGCGAGCCCGAGCCCACCATGAGCTCCTACATTCTCGAAGTCCCGGGCGGAAGCGACGTCGTTGAAACCATTGCTCGCTTCTGTCGGCGCAAGAACACGGGCCTTTGCGTCCTGACGGGCTCCGGAACCGTCGCTAACGTCACCCTCCGTCAACCGTCGTCAACTCCCGGAGCCACCGTCACTTTTCACGGCCGTTTCGACATCCTCTCGATATCCGCCACCTTTCTGGCGGCCCAGCAATCGGGGGCTCTGCCGGCGATACCAAGCGGGTTTACGATCTCGCTGGCGGGCCCACAAGGTCAGATCGTGGGAGGATTGGTGGCCGGAAATTTGATGGCGGCGGGAACGGTGTTTGTGATAGCAGCTTCGTTCAACAATCCGTCGTATCACAGGCTGCCGTGTGAGGAGGAAGTGAGGAACTCGGCGTCGGGTGGCGGAGAGGGGCAGTCGCCGCCGGTATCGGGAAGCGGTGGGGAGAGTGGACACGCGCCTTCGGAGTCGTGTGGGATGTCTATGTACAGCTGTCAACTAGCGTCGGATGTGATTTGGGCTCCAACGGCAAGACCACCACCACCTCCACCTTACTAA 840 0.6 MKGEYVEQQGKAGTPNMFSKLHLSRESQTSEEDDSSGPTPNPAHKPMSTEPTSAADGASIEVVRRPRGRPPGSKNKPKPPVIITREPEPTMSSYILEVPGGSDVVETIARFCRRKNTGLCVLTGSGTVANVTLRQPSSTPGATVTFHGRFDILSISATFLAAQQSGALPAIPSGFTISLAGPQGQIVGGLVAGNLMAAGTVFVIAASFNNPSYHRLPCEEEVRNSASGGGEGQSPPVSGSGGESGHAPSESCGMSMYSCQLASDVIWAPTARPPPPPPY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0567 279 MobiDBLite consensus disorder prediction 1 88 - -
Sto5g0567 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 28 278 - -
Sto5g0567 279 MobiDBLite consensus disorder prediction 222 251 - -
Sto5g0567 279 PIRSF ESCAROLA 6 266 IPR014476 GO:0003680
Sto5g0567 279 Gene3D - 91 226 - -
Sto5g0567 279 ProSiteProfiles PPC domain profile profile. 88 229 IPR005175 -
Sto5g0567 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 278 IPR014476 GO:0003680
Sto5g0567 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 210 IPR005175 -
Sto5g0567 279 MobiDBLite consensus disorder prediction 33 55 - -
Sto5g0567 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 220 - -
Sto5g0567 279 CDD DUF296 94 208 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0567 Sto-Chr5 3625537 3626415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0567 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.837 1.13e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0567 - - zju:107421268 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0567 5 3625537 3626415 Sto5g0567 5 3625537 3626415 ECH