Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0553 atggGAGAAGATTGTGGAACCTGGATACCGCAGCTGCATTTCGATTGGCAATCACCCAATTTGAGTTCCTTTGGTGCTTCCCTTGATGTGGGGAAGCAAAATGATAATACTTCATTTATGAACTCTGGCATTGATATGGTGTCCAGAAATGCTACCATGCCAGATTATGCGCCCTCAGTCCTACCAAGTTTGCAGTTAGGACAGTCTAATGAACCTCATGGTTGGTCCTACTGTCTGCCTCGCTTTAGACAGGCCTTTATGCCAGCTCCAAACTTTGGGGTCGAGGATAAACTCGCTGATGGCCAAGGAATACGTTTTAGGGAGGAAATTGCAGCCAATGGGATATCCGGTCTCCCTCAGAAGCAACTCATTGTTATTGACCAGACGTTCAATAAAACAACATTCGTATATAGGTCTTCGATTGGGAGTCCCATTGAGTGCCTTGCTTCTTGGCAGTCAAAATTGAATGGTCCTAACAATATGAATGGTAATGAACCTTCTGCAAGAAGAGATTTGAATCATCCGAAAGGACCAACTTTGACTGGTAAAGTTGGTGAAATCCAGGGAACTGAGGTCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCATTACTTTACTCTGATAGTGATGGATATTCCACTGAGGATGATGAAGTTACTAGCACAGGGCATTCCCCCAGTACAATGACCTCTCATGATAACCAAGACATCTTTTGGGGAAGCAATGAGGAAGTTGCTAGTTCCGCTGGAAAAACTAAGAAGCGGAAGCTATCAGATGATGGGGCTTATGATGGCATACAATTAGTGGACAGTGCAAGTTCTCTGAATCCAAACGGATCCTTTGCCAATGGAGATGATGCGGAATCAAGATGTTCTAGTTGCAACATTCAAGGATCAGGTAATAAGAAGATGAGAAAGGAGAGGATACGAGATGTTCTCAACATTCTGCAAACCATAATTCCTGGTGGAAAAGAAAGGGATCCAATTGGGCTTCTTGACGAAGCAATTCGTTGCTTGAAATCCTTGAAACTCAAGGCTAAAGCTCTCGGGCTCCATGACCTGTAA 1071 0.4351 MGEDCGTWIPQLHFDWQSPNLSSFGASLDVGKQNDNTSFMNSGIDMVSRNATMPDYAPSVLPSLQLGQSNEPHGWSYCLPRFRQAFMPAPNFGVEDKLADGQGIRFREEIAANGISGLPQKQLIVIDQTFNKTTFVYRSSIGSPIECLASWQSKLNGPNNMNGNEPSARRDLNHPKGPTLTGKVGEIQGTEVQSEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTSHDNQDIFWGSNEEVASSAGKTKKRKLSDDGAYDGIQLVDSASSLNPNGSFANGDDAESRCSSCNIQGSGNKKMRKERIRDVLNILQTIIPGGKERDPIGLLDEAIRCLKSLKLKAKALGLHDL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0553 356 MobiDBLite consensus disorder prediction 211 237 - -
Sto5g0553 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Sto5g0553 356 MobiDBLite consensus disorder prediction 218 237 - -
Sto5g0553 356 PANTHER TRANSCRIPTION FACTOR BHLH145 1 353 - -
Sto5g0553 356 MobiDBLite consensus disorder prediction 158 183 - -
Sto5g0553 356 PANTHER TRANSCRIPTION FACTOR BHLH145 1 353 IPR037546 -
Sto5g0553 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 305 350 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0553 74 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.469 1.01e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0553 - - gmx:100812109 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0553 5 3519261 3520331 Sto5g0553 5 3519261 3520331 ECH