Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0509 ATGGATAAATTATGCTGTTTCAAGTCTTCCTACTCTCAGCTTGTAGCTTCACGTTCTTCATCAAGCACTGGTAAGGGAAAAAATCACGAAGGGTCAATAAAATACGGTTTCTGCCTTGTAAAAGGGAGAGCTGATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATTCAAGGGAAAGAGTTGGGGTTGTTTGCTATTTATGATGGGCATCTAGGAGATCGTGTACCTGCTTACTTACAGAAACATTTGTTTTCCAATATCATAAAGGAGgaGGAATTTTGGCAAGACCCCGCTAGATCTATCTCTAAAGCATATGAGAGAACAGATCAGGCAATTCTTTCACAAAGTACTGATTTGGGGCGTGGTGGGTCAACTGCTGTAACTGCAATATTGATGAATGGCGAAAGGTTATTGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCTGAGCAAATGACTACTGACCATGAACCCAATACAGAACGAGGCAGCATTGAAAATAGAGGTGGTTTTGTCTCCAACTTGCCAgGTGATGTGCCTAGAGTAAATGGACAATTAGCTGTATCTCGTGCATTTGGAGACAAAAGCCTAAAATCACATTTGCGGTCAGACCCTGATGTAAAGAATACAGATATAGATACAGACATGGATATTTTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGTCTAATCAGGAGGCAGTGGATATTGCTAGGAGGACGAGAGACCCACAGAAAGCAGCAAAGCATTTAACAGCTGAAGCATTGAAAAGAGAGAGTAAAGATGATATATCTTGTGTTGTGATCTTTGATAGAAATCGCTTGCGCTACTGTAATGGTGTTATTTGTGCTGAAGCTTAG 891 0.4063 MDKLCCFKSSYSQLVASRSSSSTGKGKNHEGSIKYGFCLVKGRADHPMEDYHVAKFVQIQGKELGLFAIYDGHLGDRVPAYLQKHLFSNIIKEEEFWQDPARSISKAYERTDQAILSQSTDLGRGGSTAVTAILMNGERLLIANVGDSRAVLSRKGQAEQMTTDHEPNTERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVKNTDIDTDMDILILASDGLWKVMSNQEAVDIARRTRDPQKAAKHLTAEALKRESKDDISCVVIFDRNRLRYCNGVICAEA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0509 296 Gene3D - 29 287 IPR036457 -
Sto5g0509 296 SMART PP2C_SIG_2 45 282 IPR001932 -
Sto5g0509 296 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Sto5g0509 296 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Sto5g0509 296 CDD PP2Cc 33 280 IPR001932 -
Sto5g0509 296 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 280 - -
Sto5g0509 296 SMART PP2C_4 26 279 IPR001932 -
Sto5g0509 296 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Sto5g0509 296 MobiDBLite consensus disorder prediction 153 185 - -
Sto5g0509 296 SUPERFAMILY PP2C-like 32 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0509 Sto-Chr5 3228785 3233412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0509 1 279 PP2C-type Phosphatase Gene Family AT1G22280 72.632 7.60e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0509 K17506 - gmx:100797292 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0509 5 3228785 3233412 Sto5g0509 5 3228785 3233412 ECH