Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0474 ATGGGGGGAGCTGCCATCACAATTGCCCTTCAACAACTCAAGGGTTTCCTTGGCATTAAAAAGTTCACCAAGAAAACTGATATTGTCTCTGTCATGCATTCAGTATTCTCGTCAGCCCATCATGGATGGAACTGGCAGACTATATGCATCGCAGGAAGCTTTTTagcttttcttttgtttgctaAATATATTGGGAAGAAGGACAAGAAATTGTTCTGGATACCAGCAATTGCTCCATTGATATCTGTTGTGCTGTCCACTCTTATGGTCTACTTAACCCGTGCAGACAAGCATGGTGTTGATATTGTAAGAAAGATAGAAAAAGGGATCAATCCTTCATCTGTTCATGAGATATACTTCAGTGGTGATATGCTGGGAAAAGGTTTCAGAATTGGCATTGTGGCTGGTATGATAGCATTAACAGAAGCCACAGCAATTGGAAGAACATTTGCATCCATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCTTTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTCTCTCGGTCAGCAGTAAATTTCATGGCTGGCTGCCAAACTGCGGCCTCTAATATTGTTATGTCCATTGTTGTGTTACTAACACTGAAATTCATCACACCTCTTTTCAAGTACACTCCAAACGCCATTCTTGCTGCCATCATCATATCTGCTGTTATCAACCTTGTGGACTATAAGGCAGCAGTTTTGATATGGAAGGTTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGTGTTGTTTTTGTGTCGGTTGAGATAGGACTTCTGATTGCTGTGTGTATATCTTTTGCTAAAATCTTACTGCAAGTCACAAGGCCACGAACTGCTATTCTGGGGAATATTCCTAGGACAACTGTCTATCGAAATATACAACAATATCCAGAAGCTAGAAAGGTTTCTGGTGTTTTGATTGTTAGAGTTGATTCTGCTATATATTTCTCCAACTCCAATTATGTTAAAGAAAGGTAG 1032 0.3934 MGGAAITIALQQLKGFLGIKKFTKKTDIVSVMHSVFSSAHHGWNWQTICIAGSFLAFLLFAKYIGKKDKKLFWIPAIAPLISVVLSTLMVYLTRADKHGVDIVRKIEKGINPSSVHEIYFSGDMLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAASNIVMSIVVLLTLKFITPLFKYTPNAILAAIIISAVINLVDYKAAVLIWKVDKFDFVACMGAFFGVVFVSVEIGLLIAVCISFAKILLQVTRPRTAILGNIPRTTVYRNIQQYPEARKVSGVLIVRVDSAIYFSNSNYVKER 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0474 343 TIGRFAM sulP: sulfate permease 1 343 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto5g0474 343 ProSiteProfiles STAS domain profile. 313 343 IPR002645 -
Sto5g0474 343 Gene3D STAS domain 293 343 IPR036513 -
Sto5g0474 343 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 1 343 - -
Sto5g0474 343 PANTHER SULFATE TRANSPORTER 1 343 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto5g0474 343 Pfam Sulfate permease family 1 261 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0474 Sto-Chr5 3000634 3002357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0474 1 343 Inorganic Solute Cotransporters AT1G22150 80.466 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0474 K17470 - gmx:100797668 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0474 5 3000634 3002357 Sto9g2994 9 30917893 30921439 CCT
Sto5g0474 5 3000634 3002357 Sto5g0474 5 3000634 3002357 ECH