Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0473 atgggaTCAGTAGGTGCTGAAGCTGGAGCCATGACACAGCAGTCTCAGTCTCAGCATCATCTTGATCACACAGAGAGGTCTGAGTGGATGCTGAATTCTCCCAACCCACCACCTCCATGGACTAAGCTTTCTAATTCACTCAAGCACTCTATCCTCCCTCGCGCCAAGAACAATGTTTTCCGTACAAATGTTGTTTCCCTCTTGCACAACTTATTTCCAATCCTTACTTGGTTCAGAGATTACAATGCCTCCAAGTTTAAAGATGATTTGTTGGCTGGTTTAACTCTTGCCAGTCTCAGCATACCTCAGAGCATAGGATATGCTAATCTGGCAAAACTTGATCCTCAATATGGCCTGTATACCAGCGTTGTTCCCCCTCTTATTTATGCCGTAATGGGGAGTTCAAGAGAGATTGCAATTGGACCCGTAGCTGTAGTATCATTACTGCTATCCTCTCTGCTCTCGCAACTGCAAGATCCTGTTGCCAACCCTGAAGCCTACAGAAACCTGGCCTTTACAGTCACCTTCTTTGCTGGGATCTTTCAAGCTACATTTGGAATCTTTAGGCTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTTGGATTCATGGCAGGTGCAGCAATCATGATTGGTCTTCAGCAACTCAAGGGGTTGCTGGGGATTACTCACTTCACCAATAAAACTGATGCAGTATCTGTTTTGGGATCTGTTTATAAGTCACTACATCATCAACTTGCTTCAGGTTCTGCAGACAAATGGTACCCTCTGAATTTTGTCCTTGGGTGCTCGTTCTTGATTTTCCTTCTGGTGACCCGTTTTATTGGAAGAAGGAACAAAAAGCTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCGGTTATACTATCAACTTTAATAGTATATTTGACAAAAGCCGATAAGCATGGGGTTAATATCATAAAACACGTCAAAGGAGGCCTGAATCCAAGTTCGTCTCACCTTTTACAGCTCCATGGTCCACATGTTGGACAAGTAGCTAAAATTGGACTGATTTCTGCCATCATTGCCCTCACTGAAGCAATAGCCGTGGGTCGATCTTTTGCTTCCATTAAAGGGTACCATCTTGATGGGAACAAAGAAATGCTAGCAATGGGCTTAATGAACATAGCAGGCTCTTTAACCTCATGCTATGTGGCTACTGGATCTTTCTCAAGGACGGCAGTGAATTTCAGTGCAGGATGTCAAACGGCAATATCAAATATAGTGATGGCAGGCACTGTGGTGTTGTCACTAGAATTATTAACAAGACTCTTGTATTACACGCCAATGGCTATACTTGCTTCCATCATCCTTTCAGCACTTCCAGGACTCATTGACATAAATGAAGCATATTATATCTGGAAAGTTGACAAATTAGACTTTCTTGCCTGCATAGGCGCTTTCCTTGGGGTGTTGTTTAAATCAGTAGAGATAGGTCTTCTAGTTGCAGTAGCAATATCTTTTGCAAAGATACTGATACAATCAATTCGACCTGGAATAGAAGTTCTAGGAAGAGTTCCAAGAACAGAAGCCTTTTGTGATGTTAGTCAGTATCCCATGGCCATAAGCACTCCTGGCGTCTTGGTAATTCGCATAAGCTCTGGCTCCCTTTGCTTCGCGAATTCTAACTTCCTCAGAGAAAGAATACTGAACTGGGTGTCAAAACAGGACAATGACCATAAGGAAAGGGTCCAAGCAGTGATCCTGGACATGACCAACCTGATGAATGTTGACACATCGGGAATTCTTGCACTGGAGGAACTGCACAAGAGGTTGCAATCCCGGGGTGTACAATTAGCTATGGTGAACCCAAGGTGGCTGGTAATTCACAAGCTTAAAGTGGCGCACTTTGTGGATAAAATCGGGAAAGAATGGGTTTTTCTTACAGTTGGTGAAGCCGTGGACGCATGTCTATCTTCTAAATTTGCAATCCCTTAG 1965 0.4331 MGSVGAEAGAMTQQSQSQHHLDHTERSEWMLNSPNPPPPWTKLSNSLKHSILPRAKNNVFRTNVVSLLHNLFPILTWFRDYNASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLLSQLQDPVANPEAYRNLAFTVTFFAGIFQATFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDAVSVLGSVYKSLHHQLASGSADKWYPLNFVLGCSFLIFLLVTRFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVNIIKHVKGGLNPSSSHLLQLHGPHVGQVAKIGLISAIIALTEAIAVGRSFASIKGYHLDGNKEMLAMGLMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNIVMAGTVVLSLELLTRLLYYTPMAILASIILSALPGLIDINEAYYIWKVDKLDFLACIGAFLGVLFKSVEIGLLVAVAISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGVLVIRISSGSLCFANSNFLRERILNWVSKQDNDHKERVQAVILDMTNLMNVDTSGILALEELHKRLQSRGVQLAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEAVDACLSSKFAIP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0473 654 TIGRFAM sulP: sulfate permease 73 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto5g0473 654 MobiDBLite consensus disorder prediction 1 35 - -
Sto5g0473 654 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Sto5g0473 654 PANTHER SULFATE TRANSPORTER 17 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto5g0473 654 Pfam Sulfate permease family 86 474 IPR011547 GO:0016021
Sto5g0473 654 Gene3D STAS domain 506 649 IPR036513 -
Sto5g0473 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 17 652 - -
Sto5g0473 654 ProSiteProfiles STAS domain profile. 543 646 IPR002645 -
Sto5g0473 654 SUPERFAMILY SpoIIaa-like 533 646 IPR036513 -
Sto5g0473 654 CDD STAS_SulP_like_sulfate_transporter 527 639 - -
Sto5g0473 654 Pfam STAS domain 527 642 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0473 Sto-Chr5 2981480 2984469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0473 1 650 Inorganic Solute Cotransporters AT5G10180 63.746 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0473 K17469 - gmx:100776591 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0473 5 2981480 2984469 Sto9g2993 9 30908120 30911661 CCT
Sto5g0473 5 2981480 2984469 Sto5g0473 5 2981480 2984469 ECH