Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0468 atgatgtTGTTGATAATGATGGATGAGCAGTTTTGTGTAATGTCGCCGTCGAATTCTCCTTGCGCGGCTTGTAAGATCCAAAGGCGGAAATGCACTCAAGACTGCGTATTTGCGCCTTATTTTCCGCCGGACAACCCTCAGAGGTTCTCCTATGTCCACCAGGTGTTTGGCGCCAGCAATGTGGCCAAGATTCTTGGCGATATCAATCCTGCACAGCGTGAAGACGCCGTCAAGTCTCTTGCCTACGAAGCCGAGGCCCGTCTCCGAGATCCTGTCTACGGCTGTGTCGGCGTCATCTCCGTCCTCCAACACACCCTTAAGCTCCTCCAAGCCCAACTACTCACCGCCAAGAAAGAGCTCGCCACCTAtgtcggagtcggagtcggaccTCCACCCATGCACGGCATTCCCCCCAATGCTCCCCAATTGATCATGCCTGATCAACTCTTTCAGGCCCAGTCCCAGGCCCAGGCCCAGGCCCAGGCCCAGCAGTTTGCAATGGCCGCCACCAGAGACCAAGACGACATGATGCACCAAGACATTCTCAGACTCAATCATGTTATAAAGCGTGGGAGGCAAAATGGATATTTTCAAGAGATACGGAATACGAGAAGATAA 618 0.5065 MMLLIMMDEQFCVMSPSNSPCAACKIQRRKCTQDCVFAPYFPPDNPQRFSYVHQVFGASNVAKILGDINPAQREDAVKSLAYEAEARLRDPVYGCVGVISVLQHTLKLLQAQLLTAKKELATYVGVGVGPPPMHGIPPNAPQLIMPDQLFQAQSQAQAQAQAQQFAMAATRDQDDMMHQDILRLNHVIKRGRQNGYFQEIRNTRR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0468 205 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Sto5g0468 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 14 179 - -
Sto5g0468 205 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
Sto5g0468 205 Coils Coil 99 119 - -
Sto5g0468 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0468 Sto-Chr5 2942606 2943683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0468 14 125 AS2 family AT5G66870 73.214 2.95e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto5g0468 LOB 4.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0468 - - gmx:100812543 186.422