Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0450 ATGGCTTTACAGAATATTGGTGCTTCAAACCGTGACGATGCCTTCTATAGGTACAAGATGCCAAAAATGACAACCAAGATAGAAGGTAGAGGAAATGGCATTAGGACAAATGTGGTGAACATGGTTGACATTGCAAAGGCCCTGGCTAGACCTGCATCTTACATTACCAAGTATTTTGGTTGCGAGCTTGGGGCCCAATCAAAATTTGATGAGAAGACTGGAACTTCCCTGGTGAACGGAGCCCATGAAACTGCAAAGCTTGCAGGGCTCCTTGAGAATTTCATAAAGAAATATGTTCAATGCTATGGTTGTGGGAATCCTGAAACTGAGATAGTTTTCACAAAGACACAGATGATCACCCTAAAGTGTGCTGCATGTGGGTTTATTTCAGACGTTGATATGAGGGACAAGCTTACAACGTTTATACTTAAGAATCCTCCTGAGCAGAAGAAGGGATCAAAAGACAAGAAGGCCATGAGGAGAGCGGAAAAGGAGCGTCTCAAAGAAGGTGAGGCTGTTGATGAGGAAATAAGGAAGCTCAAGaaggaagggaaaaagaaaggaaCTGTGCCTAACTCAAAGGATGCTTCTAAAGCatcatcaaagaagaaaaatccCGGTTCGGATGAGGACCACTCCCCTGCCTACAATCATGCCAATGAAAATGGCCAATCTGatggtggtgatgatgatgatgatgatatccAATGGCAGACAGACACTTCATTGGAAGCAGTTCGCCAGCGCATCCAGGAGCAGTTAAGTGCTGTTACTGCTGACATGGTCATGCTTTCTACCAGTAGTGAAGAGAAGAACTCGCCAAAGGGTTCTccaacacatgaagtgaagaaATCGCCAAAAGGTTCTCCAACGCATGAAACCAATGGAAAGCTTGTTGAGGAGATAACAGACTATTTGAAGAAAAGCTCTTCTGCTAGTCAGCTCAAATCTTTTCTTGTCTCTCTTCCTGGCACTCCCCAAGAAGTTGTTAATGCTTTATTGGATGGTCTTTTTGAGGATGTTGGCAAAGGATTTGCCAAAGTAGCttcaaagaagaagaattaccTTGCAGTAGCTGCTCAAATTGGGGGATCTCAAATGGTTTTGTTGCATGCTATAGAGGGTTTTTGTGGGAAAGCAAGCACGGAGGCAGTGAAGGAGGTTGCATTGGTCCTAAAGGATCTCTATGATTCTGATGTGTTGGAGGAGGAGTCCATACTCGAATGGTACCAGCAGGGTGTGGTTGGAAGTAATAAGAGTTCGCAAATCTGGAAAAGAATCAAGCCTTTCATCGATTGGCTTCAGAATGCGGAGTCTGAGTCAGAGGAAGAATGA 1335 0.4082 MALQNIGASNRDDAFYRYKMPKMTTKIEGRGNGIRTNVVNMVDIAKALARPASYITKYFGCELGAQSKFDEKTGTSLVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIVFTKTQMITLKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAVDEEIRKLKKEGKKKGTVPNSKDASKASSKKKNPGSDEDHSPAYNHANENGQSDGGDDDDDDIQWQTDTSLEAVRQRIQEQLSAVTADMVMLSTSSEEKNSPKGSPTHEVKKSPKGSPTHETNGKLVEEITDYLKKSSSASQLKSFLVSLPGTPQEVVNALLDGLFEDVGKGFAKVASKKKNYLAVAAQIGGSQMVLLHAIEGFCGKASTEAVKEVALVLKDLYDSDVLEEESILEWYQQGVVGSNKSSQIWKRIKPFIDWLQNAESESEEE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0450 444 CDD W2_eIF5 293 442 - -
Sto5g0450 444 Gene3D - 105 145 - -
Sto5g0450 444 ProSiteProfiles W2 domain profile. 288 444 IPR003307 GO:0005515
Sto5g0450 444 MobiDBLite consensus disorder prediction 148 216 - -
Sto5g0450 444 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Sto5g0450 444 Gene3D - 2 104 - -
Sto5g0450 444 SUPERFAMILY ARM repeat 293 438 IPR016024 -
Sto5g0450 444 SMART 542_3 353 440 IPR003307 GO:0005515
Sto5g0450 444 MobiDBLite consensus disorder prediction 274 290 - -
Sto5g0450 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 444 IPR045196 GO:0003743|GO:0006413
Sto5g0450 444 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Sto5g0450 444 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Sto5g0450 444 MobiDBLite consensus disorder prediction 143 236 - -
Sto5g0450 444 Pfam eIF4-gamma/eIF5/eIF2-epsilon 366 444 IPR003307 GO:0005515
Sto5g0450 444 Gene3D - 291 444 - -
Sto5g0450 444 MobiDBLite consensus disorder prediction 266 296 - -
Sto5g0450 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 444 - -
Sto5g0450 444 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0450 Sto-Chr5 2809996 2811384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0450 1 437 Eukaryotic Initiation Factors Gene Family AT1G77840 65.385 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0450 K03262 - mnt:21398051 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0450 5 2809996 2811384 Sto5g0450 5 2809996 2811384 ECH