Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0442 ATGCATCACCTACCTCGATTTTTCGGCAACAGGAAGCAAACAAATGGCACCGATTCAAACAAAGCCCGAACAAAACCCAGGCTCGATCGCCGCAATGCCGTCAAGTACTTTGAGTACGATGCTGGGTCGTCTTCGTCGTCGCTAGATGACTCGTCTGGATCGCTCTGCACTCGATCAATGGAGTTATATGATCGAACCAGCTTCCGAATTGATGGAGTACAGGGCGAGGTTGATGAAATATGCAGGGCTCTAGGGCTTTCGGGACCAGAAGACTTTTCTATTCCGGCGGCGGCGTGGGAGGCTATGAAGGTTAGGTCATCTTCGGATATTGCGCCCAGGTTGAAGAAGAACGAGTCGGACAGTCAGGAGAAAAAGGAACTAAAAGAGGTGAGTCAAGTAGTGGGTGAATTGGGTGACGAATTCGAAGAGAGGGTTACGATTAGAGGAGTAACTGAGTCAATTCAAGACGAGCCTGCTCAGACTAGTGGGTGCTGCATTGCTTCTAGTGGTGTTTGTGGAGCCGGTGTCGGAGGAGGCATCAAGGGAGTCCGTCCGCCGATGCTTAAGCCACCGCCTGGTGCGAGGATTCCGGTTATTGATTTCACTTGCTCCACCTGGGACATTTTGAGGGATTTTGCTCCACAAGGTGAAAGACAATCTTTGGAAAATTACGGGCAGTTGAACTCTTCCCATGATGTCGTAGTACGAAGAGAAATGGGACAAAAAGTACAGAAAGAAGAAGTTAGGGTAGTTGAAGATAGGGTAAGTCCGAGTGGAGAAGAGGATAATCATGCAACAAAGATTGCGGAGATTGCCACCGTGCTTTCGGCATCGTGCTCGTTTACCACGTCAAATGAAGATGATTCTTCTAGCACCACCACGGATCCAGCTTCGAATAATATATCACCTAACTTGAAATTCAGGCGTATGATTACTAACTGGGAAAAGGGTGAGCTTTTAGGACGTGGCACGTTTGGATCCGTTTATGAAGGAATTTCCGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTACTTGATCAAGGGAATTTGGGGAGGCAAAGTGTCTTTTACCTTGAGCAGGATGAATCAAAACTGTATATCTTTCTTGAGCTTGTAACTAAAGGTTCCCTTGCAAGTCTCTATCATCAGTATAATCTTCGAGATTCCCAAGTATCTGCCTACACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGATACACAGggATATTAAATGTGCAAATATATTGGTAGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACGAAATTGAATGATATCAAGTCATGCAGGGGCACAGCATTCTGGATGGCACCTGAGAAGTTTATGCTTTTCTTTGGGCATGGAGTGGACATCATTGATGAAATTGTTGGTGGTGCGACCTAG 1443 0.4546 MHHLPRFFGNRKQTNGTDSNKARTKPRLDRRNAVKYFEYDAGSSSSSLDDSSGSLCTRSMELYDRTSFRIDGVQGEVDEICRALGLSGPEDFSIPAAAWEAMKVRSSSDIAPRLKKNESDSQEKKELKEVSQVVGELGDEFEERVTIRGVTESIQDEPAQTSGCCIASSGVCGAGVGGGIKGVRPPMLKPPPGARIPVIDFTCSTWDILRDFAPQGERQSLENYGQLNSSHDVVVRREMGQKVQKEEVRVVEDRVSPSGEEDNHATKIAEIATVLSASCSFTTSNEDDSSSTTTDPASNNISPNLKFRRMITNWEKGELLGRGTFGSVYEGISEDGFFFAVKEVSLLDQGNLGRQSVFYLEQDESKLYIFLELVTKGSLASLYHQYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTAFWMAPEKFMLFFGHGVDIIDEIVGGAT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0442 480 MobiDBLite consensus disorder prediction 282 301 - -
Sto5g0442 480 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 177 460 - -
Sto5g0442 480 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 20 122 - -
Sto5g0442 480 ProSiteProfiles Protein kinase domain profile. 314 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0442 480 Gene3D Transferase(Phosphotransferase) domain 1 311 471 - -
Sto5g0442 480 SUPERFAMILY Protein kinase-like (PK-like) 311 467 IPR011009 -
Sto5g0442 480 MobiDBLite consensus disorder prediction 109 129 - -
Sto5g0442 480 SMART serkin_6 314 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0442 480 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Sto5g0442 480 Pfam Protein kinase domain 360 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0442 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Sto5g0442 480 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 177 460 - -
Sto5g0442 480 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 20 122 - -
Sto5g0442 480 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0442 Sto-Chr5 2765902 2770806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0442 6 459 MAP Kinase Kinase Kinase AT4G08500 43.160 3.90e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto5g0442 Pkinase 8.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0442 K13414 - qsu:112035908 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0442 5 2765902 2770806 Sto9g2961 9 30736458 30742909 CCT
Sto5g0442 5 2765902 2770806 Sto5g0442 5 2765902 2770806 ECH