Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0429 ATGGAGGATTTGCAAAGTGCACTCAAGGATCGTAATATGACGGTTTCCACCATCGCAGATAAGGGTCGTTGTCTATTAGCTACGAGAGATTTTTACCCAGGAGAGGTAATTATAAGCCAAGAGCCTTATGTATGTGTACCTAATAAGTCTTCAGTGGAAACAAGGTGCGATGGATGTTTCGCAACAAGTAACCTTAAGAAGTGTTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGCAAATGTCAGAAGTCAGACTGGAAGTTGCATCGTCTTGAATGTGAAGTCCTCTCAAAGCTGGACAAGGACAAGAGAAAATCCGTCACACCATCCATTCGACTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGATTATCCCAAGCACTGCTATAGACAACTATAACTTGGTGGGGGCATTAGTGGCACACATGTCAGACATCAATGAGGAACAGCTGGTGCTGTATGCACAGATGGCAAACCTTGTAAAAATAATACTGCAGTGGCCTGAAATCGACATAAAAGAGATTGCAGAAAATTTTTCCAAGTTTGCATGCAATGCACACACCATTTGTGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCCGTAATCTCCATAATCAACCACAGTTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAAGTCAGCTATAGTACGTGCTGTGCAACATATACCGAAAGGTTCAGAGGTGCTGATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCGGCAGAAGGCTCTGAAAGACCAGTACCTATTCACTTGCACATGTCCCCGCTGTGTTAAATTGGGCCAGTATGATGATGTTCAAGAAAGTGCGATTTTGGAAGGATATAGATGCAAGAATGAAAAATGCTGTGGTTTCTTGCTTCGTAAAACTGATGGAAAAGGATTCCAATGCCAAGAATGTGGATTAGTCAGGGACATGGAAGAGATAAAGAAGATTGCTACCGAAGTAAAGGCACTGTCAGAAGACAAAGCTAGTAAATTTTGCTCCACTGGCAATTGTCAGGAAGCTCTTACTATATACAAAATGATTGAGAAACTCCAAACAGAATTGTGCCATCCTTTCTCTATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGCTGGAACATTGGAGAGAAGCTCTAGCATATTGCAAATTGACCTTACCAGTCTATCAAAGAGTTTATCCAGCAGTTCATCCTTTGCTTGGTTTGCAATATTATACTTGTGGAAAACTTGAATGGTATCTGGGGGACACACAGAGTGCTGTTAAATCTCTGACTAAGGCAGTGGATGTACTAAGAATTACTCATGGAACAAATACAGCCTTCATGAAGGATCTCTTGATGAAGTTGGAAGAGGCACGTGCTGAAGCGTCTTACCAACAGTCCTCCAAAGATGAGTAG 1449 0.4168 MEDLQSALKDRNMTVSTIADKGRCLLATRDFYPGEVIISQEPYVCVPNKSSVETRCDGCFATSNLKKCSGCQVVWYCGSKCQKSDWKLHRLECEVLSKLDKDKRKSVTPSIRLMVKLYLRRKLQSEKIIPSTAIDNYNLVGALVAHMSDINEEQLVLYAQMANLVKIILQWPEIDIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGKSAIVRAVQHIPKGSEVLISYIETAGSTMTRQKALKDQYLFTCTCPRCVKLGQYDDVQESAILEGYRCKNEKCCGFLLRKTDGKGFQCQECGLVRDMEEIKKIATEVKALSEDKASKFCSTGNCQEALTIYKMIEKLQTELCHPFSISLMQTREKLLKLLMELEHWREALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYLGDTQSAVKSLTKAVDVLRITHGTNTAFMKDLLMKLEEARAEASYQQSSKDE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0429 482 Pfam MYND finger 56 93 IPR002893 -
Sto5g0429 482 Gene3D Tetratricopeptide repeat domain 402 481 IPR011990 GO:0005515
Sto5g0429 482 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Sto5g0429 482 Gene3D - 106 190 - -
Sto5g0429 482 SMART set_7 11 254 IPR001214 GO:0005515
Sto5g0429 482 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Sto5g0429 482 Gene3D SET domain 24 274 IPR046341 -
Sto5g0429 482 Gene3D - 55 105 - -
Sto5g0429 482 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 473 - -
Sto5g0429 482 SUPERFAMILY TPR-like 340 447 IPR011990 GO:0005515
Sto5g0429 482 SUPERFAMILY SET domain 13 247 IPR046341 -
Sto5g0429 482 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 473 - -
Sto5g0429 482 Pfam SET domain 22 247 IPR001214 GO:0005515
Sto5g0429 482 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto5g0429 SET 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0429 K11426 - cit:102613642 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0429 5 2675493 2680593 Sto5g0429 5 2675493 2680593 ECH