Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0428 ATGGATGGGAAGGCTAACCTTCCGGTCCCACCTCCAACTGCGAACAATCTGATCCGCCCAATCAATCCCGATACTACATCGTCTTCCTCATCGTCCTTCACTTCCTCGCCACCGGGCTTTCTTCGGCATGTTCAAGCAGCCTTGAAGCGCCATCGTCCGCTCGGTACAATGCAATCAAATATAAGGCCAAAGCGCTCAATTGTTCCTCAACGAGAGGTGTCTAGAAGTTCTACGTTGACAATTGGTCCAACTGTAGATATTAAGTCTCAagatatattattaaGTCAAGAGGATGTGTCAATTATACCTCCTTCTATTTCTGTCAATTCCAGCAATGCATTTGAGGGAGGTTGCAAACCATTCGATGCGCAAGAATGTTGTCCAAATGCAATGGCTAAATGTAAAGACAAGATTATCACACATTCTTTGCAGGTGGAGTCTCAAAATATAGAAGGTCAAAAGAAAGTCCAGTTCTCAATTGGAAACAACACTACTGCCCtggGGGCCGATGATGGAAAGGCCACTGAGTTGGAGAAATTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCAGCCATCTGGAAGAATCTAATGCATTCTACCAAGATTCAAAGCACCAAAGTGTTTTGCAAGCAGAGTCTGAAGTAAGTTTGAGATCTGAGGGAGGAGTAAGTTCCCAGTTGGCAAAAAGAACAACAGCTCTTCAGGATCATCTGCAGCAATTTAGAAACTTCTTAAGTCAGCCGGCTACTCTATCTTCAGTAGTGGGACCTTCATGTGCTACAACCACATCAGTCCATTCATCTTCAGCACCTATGCTAAATTCAACAACCCATTATTCCCATTCACATCTAGATGGTGGCTCAAATGTGGCAGCTGAACCTCTCAAGGACAGTAATGTCAATTCTCATTTCATAACTCCAGGAGTTGTCAAATCATCAAATATTTCCTTGAAAGAGACCAATGGAATGTCAGTGGATCAGCCAGCAGTTGCATTCCAAGGTTCTAGTTCTGCTATTAATGCAGGGTCAACAGTTAAGGACAGTGACCTATCTAAGGAGCAGCAAGGCAGCATTCTGAAAGAAATTAACATTTCTAAAAATGCATCTTATAACAATGATAAGTCAACTAGGGGAAAGGAGTCAGCAGATATTACCAACATACAATCTCAGGCTCCAATGTCGAAAACCTCATTTTCAGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAACCAGAGAAGGCAGCAAGTAGCAAAGGTGCATCGGCTGCACGGAAAAGGACCTATGATCCCGATTTGTTCTTCAAAGTAAATGGAAAGCTCTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGCAGTGAAGTACACAAAGTAATTTCATCAGACTGTACAATATATGCACTTAAAAAGATCAAGCTAAAAGGTCGTGATTATGCCACTGCTTATGGGTTTTGTCAAGAGATTGAATATCTAAATAGGCTGAagggaaaaaataatattatacagCTGATTGACTACGAGGTGACTGACAAGGCTTTGCTTGCGGAAGTCATGAGAGGCTCCTTGAGTAATAAGGATGCCCGAGTCAAGGATGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCACATGCTTTCCCAGAAGTGGAAGGAACTGGATGGATATGACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATACTTCAAGCTGTTAATACTATACACGAAGAGCGTATTGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTTGTCAAAGGTTCTCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACAACAAACATCCAACGGGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAAAGTGATGCAAATGGAAACATCATAAAGTGTGGTAGGCCGTCGGATATTTGGTCTCTCGGCTGCATTCTTTATCAAATGGTATATGGCAGAACACCGTTTGCAGAGTACAAGACCTTCTGGGCCAAATTCAAAGTTATAACAGATCCAAATTATGAAATCACGTATGAACCAGTTTCTAACCCATGGCTTCTGGATCTCATGAAAAGGTGTCTAGCATGGGACCGCAATGAAAGGTGGAGAATTCCTCAGCTTCTCCAACATCCTTTCCTTGTTCCACCTGCTCCGCCTCATGCTTCCTCGTCCCAAGACCAAAGCTTTAAATTGCTGCAATTTATTTCTGAAACTTGTATAGATGACCCAGACGCTTCAAAGCTTTGTTGTCAGATCCAGCAGTTACTTGGTGATCCGCTCAAGTTAATAACACCTCACTCACTAAGCTCACGAGAACAGCAACGTAAACTGTTGTCCCAAATGTCAGAACTTTGCCTCCAGCTGCAGCAACGTCTGACAAATACAGATGAAGAATGA 2481 0.42 MDGKANLPVPPPTANNLIRPINPDTTSSSSSSFTSSPPGFLRHVQAALKRHRPLGTMQSNIRPKRSIVPQREVSRSSTLTIGPTVDIKSQDILLSQEDVSIIPPSISVNSSNAFEGGCKPFDAQECCPNAMAKCKDKIITHSLQVESQNIEGQKKVQFSIGNNTTALGADDGKATELEKLSSHMGSLALTEMEWAASSHLEESNAFYQDSKHQSVLQAESEVSLRSEGGVSSQLAKRTTALQDHLQQFRNFLSQPATLSSVVGPSCATTTSVHSSSAPMLNSTTHYSHSHLDGGSNVAAEPLKDSNVNSHFITPGVVKSSNISLKETNGMSVDQPAVAFQGSSSAINAGSTVKDSDLSKEQQGSILKEINISKNASYNNDKSTRGKESADITNIQSQAPMSKTSFSDVKLESSKLEKPEKAASSKGASAARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLAEVMRGSLSNKDARVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYDQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFAEYKTFWAKFKVITDPNYEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPAPPHASSSQDQSFKLLQFISETCIDDPDASKLCCQIQQLLGDPLKLITPHSLSSREQQRKLLSQMSELCLQLQQRLTNTDEE 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0428 826 ProSitePatterns Protein kinases ATP-binding region signature. 454 476 IPR017441 GO:0005524
Sto5g0428 826 CDD PKc_Mps1 446 741 - -
Sto5g0428 826 MobiDBLite consensus disorder prediction 376 429 - -
Sto5g0428 826 Pfam Protein kinase domain 448 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0428 826 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 26 792 IPR027084 GO:0004712|GO:0007093|GO:0051304
Sto5g0428 826 SUPERFAMILY Protein kinase-like (PK-like) 442 750 IPR011009 -
Sto5g0428 826 MobiDBLite consensus disorder prediction 18 39 - -
Sto5g0428 826 ProSiteProfiles Protein kinase domain profile. 448 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0428 826 Coils Coil 806 826 - -
Sto5g0428 826 MobiDBLite consensus disorder prediction 376 408 - -
Sto5g0428 826 Gene3D Phosphorylase Kinase; domain 1 441 527 - -
Sto5g0428 826 PANTHER MIXED LINEAGE PROTEIN KINASE 26 792 - -
Sto5g0428 826 Gene3D Transferase(Phosphotransferase) domain 1 564 744 - -
Sto5g0428 826 SMART serkin_6 448 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0428 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Sto5g0428 826 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0428 Sto-Chr5 2670457 2674856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0428 454 742 MAP Kinase Kinase Kinase AT4G08470 28.767 3.45e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Sto5g0428 Pkinase 2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0428 K08866 - qsu:111990938 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0428 5 2670457 2674856 Sto5g0428 5 2670457 2674856 ECH