Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0421 ATGGAAACTATCTTTTATATCTTTcacatttttctcttcttttctgccATCTCTGCTTACACTTTCTCCGATTATATCAATCCAAATTTCACTGCTTCAAATGTTAAATTCATTGACAACTCTGGCACCTTCTTGTCATCCCCCAATGGAACATTTGAGGCTGCTATGTTCAACCCCGCTGCTCAACAAACCAATTTCTATTTGTGTGTCATTCATGTGGCATCAAACACCATCATTTGGTCGGCGAATCGTGATGCTCCCATCTCAGATTCTGGTCAAATGAATCTGACTATCGAAGGGATTACTATTGTTGATCAGGATGGAATTCCCAAATGGTCAACTCCACCATTGAATTCACCAGTATACGCATTACAGCTAACTGATTCGGGCAACCTTGTCTTACTTGATCGTTCCAATGTTTCTCTTTGGGAGAGCTTCCACTATCCAACAGACACAATTGTTATTGGACAACAGTTACCTGTTGGGTCCTTGTTGTCATGTGGTGTATCAGATTCAGACTTGTCAACTGGGGATTACAAGCTGAGGATTTCTACATCTGATGCAATACTTGAGTGGCATGGACAGACATACTGGAAGTTGTCGATGGTTGCAAATGCCTTTAGGGATACAAATTATATGGTAGAATACATGGCTGTAAACTCAACAGGTCTCAATCTATTTGGAAGTGATGGAACAGTGACAGTGACTGTGCTTAAGGTTGTCTTGCCTCTGGCTGATTTTCGAATTGCCAAATTGGCTTCCAATGGCCAGTTTATCGTCAGAAGCTTTTCCGGTAATAATTGGAAGCAAGAATTTGTGGGGCCAGAAGATGGTTGTCAAACTCCCTTTATTTGTGGTAGTGTAGGATTGTGTACTGATGATACTACTACAGGTACATCCTCTACACCTACTTGCTCTTGTCCTCCAAACTTCCGTGCAGGCTCAAATAATTTTTCTGCTTGCGTGCCTAGTAACGGTTCCTATTCTTTGCCACGGGCTTGTAATTCATCTCTTTCATATTTGAAACTTGGGAGTGGTATGCAGTACTTCACCAATATTTACTCTGATCCGGTAAGATATGGAGTGAACTTAACCGTCTGCCAGGATCTGTGTTCTAGGAATTGTTCGTGTTTGGGAATTTTCTATGAAAACTCGTCTGGTTCTTGCTATGTGCTTGAAAATGAGTTGGGTTCTATTATGTCAAGCAGTAATAGTGGAAGTAACCTGTTGGGCTACATCAAAACAATTGTTGTATCTGCCACTACTACTGATGATCCTACTTCTCATTCTCAAAGAAACAAATTTCCTGTGGCTGCTTTGGTGCTGTTACCTATTActgtattcattttttttatggcTATAGGTTTCTTCTGGTTGAGGAGAAAGAAAAAGTCCAAGacaaaagatataaaattaggaaaattcAACTCGCATTCTTCAGAGGACTTGTCTGCCTTCTACATTCCAGGCTTACCTAAAAGGTTTGATTATGAAGAGCTTGAGTTGGCCACAGATAATTTCAAGACTCTAATAGGGTCAGGTGGATTTGGTGCTGTGTACAAGGGAGTATTGCTGGATAAGAGCGTTGTGGcagtaaagaaaataatgaatttGGGGAATCAGGGGAAAAAAGATTTCTGCACAGAGATCGCAATCATTGGAAATATTCACCACGTGAATTTGGTGAAACTGAAAGGCTTTTGCGCTGAAGGGAGACAACGTTTGTTGATTTATGAGTACATGAACCGTGGGTCCTTGGATCGCACCCTCTTTGGTGGTGGACCTGTGTTAGAATGGCAAGAGAGATTTGATATAGCACTTGGAACAGCTCGTGGACTTGCCTATCTGCACAGTGGGTGTGAGCAAAAGATCATTCATTGTGATATCAAACCCGAGAATATTCTTTTGCACGATCAATTCCAGGCTAAGATCTCCGACTTTGGGCTTTCAAAACTCCTTAGCCCAGAGGAGTCTGGTTTATTCACAACAATGAGAGGTACACGGGGTTATCTAGCTCCAGAGTGGCTTACTAACTCTGCAATCACAGAGAAAACTGATGTGTATAGTTATGGAATGGTACTGCTGGAAGTGGTGAGTGGAAGGAAAAATTGCTCTGTGAAGTCACGAAGCCATAGCATGGATGAGAGTAATAGTTGTGGTGGGTATTCATCGGCATCTTCAGTGGcaggattggtttattttccaTTATTTGCATTAGAGATGCATGAGCAAGGTAAGTACCTTGAGCTTGCCGATCCAAGATTAGAAGGGCGTGTTTCAAGTGAGGAGGTGGAGAAACTAGTGCGGATTGCCTTGTGTTGTGTTCATGAAGAGCCAGCACTTAGGCCAAACATGGCTACTGTTGTTGGCATGTTGGAAGGTGCTACACCATTGGCCCAACCGAGGATTGAATCTTTGAATTTCCTGCGCTTTTATGGGCGTAGATTTACAGAGGCTTCCATGATAGCTGAGGAAAATGAGAATGACTCTATGCTGCATCAACCACCACAAGAATCAACGCCTACAACAAGTGGTTCACAAACTGCTTTTTCTTATGTTTCTTCACACGATATCTCAGGGCCAAGATAG 2589 0.4067 METIFYIFHIFLFFSAISAYTFSDYINPNFTASNVKFIDNSGTFLSSPNGTFEAAMFNPAAQQTNFYLCVIHVASNTIIWSANRDAPISDSGQMNLTIEGITIVDQDGIPKWSTPPLNSPVYALQLTDSGNLVLLDRSNVSLWESFHYPTDTIVIGQQLPVGSLLSCGVSDSDLSTGDYKLRISTSDAILEWHGQTYWKLSMVANAFRDTNYMVEYMAVNSTGLNLFGSDGTVTVTVLKVVLPLADFRIAKLASNGQFIVRSFSGNNWKQEFVGPEDGCQTPFICGSVGLCTDDTTTGTSSTPTCSCPPNFRAGSNNFSACVPSNGSYSLPRACNSSLSYLKLGSGMQYFTNIYSDPVRYGVNLTVCQDLCSRNCSCLGIFYENSSGSCYVLENELGSIMSSSNSGSNLLGYIKTIVVSATTTDDPTSHSQRNKFPVAALVLLPITVFIFFMAIGFFWLRRKKKSKTKDIKLGKFNSHSSEDLSAFYIPGLPKRFDYEELELATDNFKTLIGSGGFGAVYKGVLLDKSVVAVKKIMNLGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHDQFQAKISDFGLSKLLSPEESGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSYGMVLLEVVSGRKNCSVKSRSHSMDESNSCGGYSSASSVAGLVYFPLFALEMHEQGKYLELADPRLEGRVSSEEVEKLVRIALCCVHEEPALRPNMATVVGMLEGATPLAQPRIESLNFLRFYGRRFTEASMIAEENENDSMLHQPPQESTPTTSGSQTAFSYVSSHDISGPR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0421 862 Pfam S-locus glycoprotein domain 248 313 IPR000858 GO:0048544
Sto5g0421 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Sto5g0421 862 SMART serkin_6 505 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0421 862 Gene3D Transferase(Phosphotransferase) domain 1 581 804 - -
Sto5g0421 862 ProSiteProfiles Protein kinase domain profile. 505 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0421 862 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 200 IPR036426 -
Sto5g0421 862 CDD B_lectin 38 149 IPR001480 -
Sto5g0421 862 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Sto5g0421 862 Pfam Protein kinase domain 508 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0421 862 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 862 - -
Sto5g0421 862 MobiDBLite consensus disorder prediction 827 862 - -
Sto5g0421 862 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 6 862 - -
Sto5g0421 862 MobiDBLite consensus disorder prediction 830 855 - -
Sto5g0421 862 SMART blect_4 36 149 IPR001480 -
Sto5g0421 862 Gene3D - 40 176 - -
Sto5g0421 862 ProSiteProfiles PAN/Apple domain profile. 334 416 IPR003609 -
Sto5g0421 862 PIRSF SRK 1 851 IPR024171 GO:0004674
Sto5g0421 862 CDD STKc_IRAK 511 794 - -
Sto5g0421 862 Pfam D-mannose binding lectin 77 159 IPR001480 -
Sto5g0421 862 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Sto5g0421 862 SUPERFAMILY Protein kinase-like (PK-like) 481 793 IPR011009 -
Sto5g0421 862 ProSitePatterns Protein kinases ATP-binding region signature. 511 534 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0421 Sto-Chr5 2631584 2634202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0421 450 801 Receptor kinase-like Gene Family AT5G20050 40.270 1.20e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto5g0421 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0421 - - tcc:108663118 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0421 5 2631584 2634202 Sto5g0421 5 2631584 2634202 ECH