Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0417 ATGGCCATGCCTATGCCTGAGGTCGAATTTTGCGGCTACACCACGGGTTCTTCGGAAGACGAGGCTGCTTGGAACCACTGGTCCCCCGTGGTGAACTGGGATGCGTTGACCGCGGGCAGTGAGCAGGACGGTTTCCACGAGCTGATGGAGAGCCTGATGGATATGAGTCCCGAGGAAGAGGAATTAGCGTGTTGCAACTCTTGTTCCTCCACGGGGGAAGAAGTAGAAGGCAACGCTACCACTACTCATCATCTGGATGCTTCAAAGGGTGTTAGATTGGTTCACCTGCTCATGGCTGCGGCTGAATCCCTCAACAACACCCCTGATCTCGCTCGAGTGATATTGCTTCGCCTCAATCAGCTTGTGTCCCCCACCCACGGCACCAACATGGAGAGACTAGCCGCCTATTTTGCCAACGCCTTGCACGCTTTGCTAGAAACCGCCGGCCCTGGGGGTGCCTACAATACCAAGCATTTCAATTACACACAAGTCCTAACCGCTTTCCAGCTCCTTCAGGACATGTCCCCCTACCTCAAGTTCGCCCACTTCACCGCTAATCAGGCCATCATCGAGGCCGTGGCCCAGGAAAAGCGGGTCCACATCATCGACTACGACATCATGGAAGGCACCCAATGGGCCTCCCTCATGCAGGCCCTATGCTCGCGAAAGAACGGCCCACACATCAGAATCACGGCCCTCACCAGACCGGGAACCGGGAGAAGATCAATGGCCACGGTTCAAGAAACGGGACGTCGTTTGACTGCGTTTGCGGCTTCCATAGGGCAGCCCTTGTCGTTTCACCAATGCAGAGTGGAGGCAGACGAAACGTTTCGAGCGTCGGCGTTGAAGCTGGTTCGGGGGGAAGCGGTGGTGTTGAACTGTATGCTGCACCTGCCTCACCAGAGCTACCGCGGAGGGGAAATGGAATCGGTGGAGTCGTTTATAAAGGGAGGGAAGGAGTTGAAGGCGAGGGTGGTGACGatggtggaggaggaggagggaggGCGGAGATCAGGGGAAGGGGAAGGGGAAGGGGGGTTTGTGGGGAGATTCATGGAGAGGTTGCATCATTATTCGGCCATGTATGATTCGCTGGAGGCCGGGTTTCCAATGGAGGGAGGGGGAAGGGCCTTGGTGGAGAGGGTGTTTATGGGGCCCAGAATAGCCGCATCCTTGGCTAGGATATACAAGCACCAATCCCAAACATGGAGCTGGAGGGAATGCTTCACTGACCTCGGCTACAGGGGAGTGGACATCAGCTTCGCCAATCATTGTCAGGCTAAACTCTTGTTGGGTTTGTTCAATGATGGTTATAGGGTGGAGGAGTCGGGTGCCCATGCAATTCCAGACGAAGCAAGAGACAACCATATCATGCAACGGAACTTTGAAATGCTCTAG 1398 0.5443 MAMPMPEVEFCGYTTGSSEDEAAWNHWSPVVNWDALTAGSEQDGFHELMESLMDMSPEEEELACCNSCSSTGEEVEGNATTTHHLDASKGVRLVHLLMAAAESLNNTPDLARVILLRLNQLVSPTHGTNMERLAAYFANALHALLETAGPGGAYNTKHFNYTQVLTAFQLLQDMSPYLKFAHFTANQAIIEAVAQEKRVHIIDYDIMEGTQWASLMQALCSRKNGPHIRITALTRPGTGRRSMATVQETGRRLTAFAASIGQPLSFHQCRVEADETFRASALKLVRGEAVVLNCMLHLPHQSYRGGEMESVESFIKGGKELKARVVTMVEEEEGGRRSGEGEGEGGFVGRFMERLHHYSAMYDSLEAGFPMEGGGRALVERVFMGPRIAASLARIYKHQSQTWSWRECFTDLGYRGVDISFANHCQAKLLLGLFNDGYRVEESGAHAIPDEARDNHIMQRNFEML 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0417 465 Pfam GRAS domain family 93 445 IPR005202 -
Sto5g0417 465 ProSiteProfiles GRAS family profile. 84 465 IPR005202 -
Sto5g0417 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 442 IPR005202 -
Sto5g0417 465 PANTHER SCARECROW-LIKE PROTEIN 26 23 442 IPR030028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0417 Sto-Chr5 2605391 2607429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0417 59 444 GRAS Transcription Factor Family AT5G41920 33.750 1.18e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto5g0417 GRAS 1.6e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0417 - - vvi:100250491 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0417 5 2605391 2607429 Sto5g0417 5 2605391 2607429 ECH